SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene16795

Length: 916 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene16795

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14140	25/25

Source	Descriptions	Term	Type	e value	Identity
AutoFact	chloroplast Tha4-1 [Physcomitrella patens]	-	-	3.0e-22	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	sec-independent protein translocase protein	-	-	0.0	74%

Source	GOs	Term	Type	Identity
Blast2go	protein secretion	GO:0009306	Biological Process	74%
Blast2go	protein transporter activity	GO:0008565	Molecular Function	74%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	74%
Blast2go	plasma membrane	GO:0005886	Cellular Component	74%
Blast2go	integral to membrane	GO:0016021	Cellular Component	74%
Blast2go	chloroplast thylakoid membrane	GO:0009535	Cellular Component	74%

Source	InterPros	Term	Type	Identity
Sma3	Twin-arginine translocation protein TatA/B/E	IPR003369	-	-
Sma3	Twin-arginine translocation protein TatA/E	IPR006312	-	-
Sma3	Twin-arginine translocation protein TatB-like	IPR003998	-	-

Full-Lengther Next Prediction

SNPs (tot: 70)

Position	A %	C %	G %	T %	Probability
42	57	42			1.0
45		57		42	1.0
46	57		42		1.0
48		42	57		1.0
50	57			42	1.0
53		57	42		1.0
55	57			42	1.0
58		42	57		1.0
60		42	57		1.0
66	87	12			0.992554
67	87		12		0.992554
69	87	12			0.992554
73	87	12			0.992554
74	87	12			0.992554
76			87	12	0.992554
78	66	25	8		1.0
81	66	25		8	1.0
84		8	25		1.0
85	33		66		1.0
86		33	66		1.0
87		25		75	1.0
88	66	8		25	1.0
89	75			25	1.0
92		25		75	1.0
94			25	75	1.0
96		25	75		1.0
100		25	75		1.0
251	87	12			0.999964
253	87			12	0.999964
254	87	12			0.999964
256			86	13	0.999973
258	13		86		0.999973
259		13	86		0.999973
260		13		86	0.999973
263	80	6			0.999961
265	80	6	13		0.999961
266		14	85		0.999981
269	85			14	0.999981
425	87			12	0.992554
426	87	12			0.992554
428	87	12			0.992554
429	87			12	0.992554
430	87	12			0.992554
431	12		87		0.992554
487		88	11		0.923564
491	88	11			0.923564
492		11	88		0.923564
493		88		11	0.923564
497	88	11			0.923564
498	88			11	0.923564
500	87			12	0.992554
501	87	12			0.992554
502	75	25			1.0
503	58	16	25		1.0
504	58			41	1.0
505	58	41			1.0
506	75		25		1.0
509	25			75	1.0
512	75			25	1.0
513			75	25	1.0
515			25	75	1.0
523		25		75	1.0
525		25		75	1.0
526	25		75		1.0
540	45		54		1.0
630	75			25	1.0
631	75	25			1.0
632			25	75	1.0
633		25		75	1.0
838	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain