SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene16686

Length: 1723 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene16686

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18521	43/64
SustainPine v2.0	sp_v2.0_unigene31221	21/64

Source	Descriptions	Term	Type	Identity
AutoFact	1-acyl-sn-glycerol-3-phosphate acyltransferase [Prunus mume]	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	1-acyl-sn-glycerol-3-phosphate acyltransferase	-	-	82%

Source	ECs	Term	Type	e value	Identity
Blast2go	1-acylglycerol-3-phosphate O-acyltransferase.	EC:2.3.1.51	-	0.0	82%

Source	KEGGs	Term	Identity
Blast2go	Glycerolipid metabolism	00561	82%
Blast2go	Glycerophospholipid metabolism	00564	82%
Blast2go	Metabolic pathways	01100	82%

Source	GOs	Term	Type	e value	Identity
Blast2go	1-acylglycerol-3-phosphate O-acyltransferase activity	GO:0003841	Molecular Function	0.0	82%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	0.0	82%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phospholipid/glycerol acyltransferase	IPR002123	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5A8C8

Fln msg:

Fln protein: MELPSAVVVLPMGALFLLSGLIVNCIQALCYVILRPFSKNLYRMANRVVAELLWVELVWLIDWWAGVKIRIYADPDILQHMGKEHALVISNHRSDVDWLVGWVLAQRSGCLGSALAVMKKSSKFLPVMGWSMWFSEYVFLERNWAKDETTLKSGLKKLRDFPRPPWLALFVEGTRFTKAKLLAAQEYAASVGLPVPRNVLIPRTKGFVAAVSNLRSFVPAIYDVTVAVPKDEPSPTMLRLLKRQPSVLHVHIKRHCMTDLPDTDDGVAQWCKDTFVSKDGLLDKHQSDNTFGEHLHQPIQRPLKPLLVVLGWSSLLSLPTYKLLRHLLSSWQGSLWLTVGFILTTLVMNVFIRFSQSEHSTPAKVVPAKESNGRVLPSGKEDKDL*

Protein Length: 387

Fln nts: CGTCGTGACCTTGGCCGTCGTGACCTTGGCTGTGACTCAGGGTGTTATTATCGTGTTTTAACAAATAGGAGGCGGACGAGCATCAGGGCAGATCAGTGAGGGAGGGTTGTCGCAGAGCA_-_ATGGAGTTGCCATCTGCAGTAGTTGTCCTGCCCATGGGAGCTCTCTTTCTTCTCTCAGGCCTTATAGTCAATTGTATTCAGGCTCTATGCTATGTCATTTTGCGGCCATTTTCAAAAAATCTTTATCGGATGGCTAATAGAGTTGTGGCAGAGTTACTTTGGGTGGAACTTGTTTGGTTGATCGACTGGTGGGCAGGTGTTAAGATACGCATATATGCAGATCCTGATATATTGCAGCATATGGGTAAAGAACATGCTCTTGTAATATCCAATCACCGCAGTGACGTTGACTGGCTTGTGGGATGGGTTTTAGCCCAGCGCTCTGGTTGCCTTGGTAGTGCTCTTGCAGTTATGAAAAAATCATCAAAGTTTCTTCCAGTAATGGGATGGTCTATGTGGTTTTCAGAGTATGTATTCCTTGAGAGAAATTGGGCCAAGGATGAGACCACATTGAAGTCAGGGCTAAAGAAGTTGAGAGATTTCCCTCGACCACCTTGGCTGGCACTTTTTGTAGAGGGCACACGCTTCACCAAAGCTAAGTTGCTTGCAGCTCAGGAGTATGCGGCATCTGTGGGCTTGCCAGTGCCACGGAATGTTTTGATCCCTCGCACCAAGGGTTTTGTCGCAGCTGTTAGCAACTTGCGCTCATTTGTTCCAGCCATATATGATGTCACTGTTGCAGTTCCTAAAGATGAGCCTTCTCCAACAATGCTGCGGCTTTTGAAACGTCAACCATCGGTGTTGCATGTCCATATCAAGCGACATTGCATGACTGATTTGCCTGATACGGATGATGGAGTGGCACAGTGGTGCAAAGACACATTTGTTTCTAAGGATGGTCTGTTAGATAAACACCAAAGTGACAACACATTTGGAGAGCATCTCCATCAACCCATACAACGGCCTCTGAAGCCACTACTGGTGGTATTGGGATGGTCTTCTCTTTTATCACTGCCTACATACAAGCTATTAAGGCATCTTCTAAGCTCTTGGCAAGGTTCTCTTTGGTTGACAGTGGGTTTTATATTGACAACATTAGTGATGAACGTCTTTATACGCTTCAGCCAGTCGGAGCATTCTACTCCAGCAAAGGTTGTTCCAGCCAAAGAAAGCAATGGGAGAGTGTTGCCCAGTGGTAAGGAGGACAAAGACCTCTGA___GTAAGACACTGGATGAAATGATTTGTACGTTTGGAATCTTTGGGTAGTGGACCGTCGTATTTTCGATTCAAAAGTCATATTTTTCTCTCAGATTGTTTATAGTCAATTTCAGTGTAATCTTCCGGTAGGCTACTGAAGTATCCGGGAGCAAGTTACAAGGGATATATGATGTAGATTAGATATATCATGCATTATTTTACTTTGTAAACTGAATGGTCCATTTGTTGTAAAGTATTTACAGGGACATTCTATAATCATTTATGTTGGCTTTGGTTTCTTACCTCAAGAATTGTGTAACATAGTCAGTAATTCACATGTCACAAATTAAGGTCATTTAAATATTGAAGCTGATCATCATCTTCATATGATGGTTTCATTTTGGAAACACATAGCAAGAATTTGTGCGAGTTAGGCCTTTAAATTTAAATGGGGAATTAGATTCAGAC

Fln Alignment:

Contig16686___MELPSAVVVLPMGALFLLSGLIVNCIQALCYVILRPFSKNLYRMANRXXXXXXXXXXXXXXXXXAGVKIRIYADPDILQHMGKEHALVISNHRSDVDWLVGWVLAQRSGCLGSALAVMKKSSKFLPVMGWSMWFSEYVFLERNWAKDETTLKSGLKKLRDFPRPPWLALFVEGTRFTKAKLLAAQEYAASVGLPVPRNVLIPRTKGFVAAVSNLRSFVPAIYDVTVAVPKDEPSPTMLRLLKRQPSVLHVHIKRHCMTDLPDTDDGVAQWCKDTFVSKDGLLDKHQSDNTFGEHLHQPIQRPLKPXXXXXXXXXXXXXPTYKLLRHLLSSWQGSLWLTVGFILTTLVMNVFIRFSQSEHSTPAKVVPAKESNGRVLPSGKEDKDL
D5A8C8________________MELPSAVVVLPMGALFLLSGLIVNCIQALCYIILRPFSKNLYRMANRVVAELLWLELVWLFDWWAGVKIRIYADPGILQHMGKEHALVISNHRSDVDWLVGWVLAQRSGCLGSALAVMKKSSKFLPVMGWSMWFSEYVFLERNWAKDETTLKSGLKKLRDFPRPFWLALFVEGTRFTNAKLLAAQEYAESVGLPVPRNVLIPRTKGFVSAVSNLRSFVPAIYDVTVAVPKDEPSPTMLRLLKSQPSVLHVHIKRHHMSDLPDTDDGVAQWCKDTFVSKDGQLDKHQSDNTFGEHLYQPIQRPLKPLLVILGWSSLLSVPAYKLLRHLLSSWQGSLCLTVGFILTTLVMNIFIRFSQSEHSTPAKVAPAKETNGRVLPIGKEDKDL

SNPs (tot: 63)

Position	A %	C %	G %	T %	Probability
85	88		11		0.999937
90			88	11	0.999937
94		11	88		0.999937
95	88	11			0.999937
97		88		11	0.999937
98	88		11		0.999937
103			88	11	0.999937
104		11	88		0.999937
105	11		88		0.999937
106	88	11			0.999937
107			88	11	0.999937
108		11	88		0.999937
109	11		88		0.999937
607		20	80		1.0
611	6	13		80	0.999961
612		20	80		1.0
614		80		20	1.0
615		80		20	1.0
623			20	80	1.0
1004	20	60		20	0.99255
1008			20	80	0.995493
1084	66	11	22		0.999999
1086		22		11	0.999999
1087	88		11		0.923564
1088		88		11	0.923564
1089	77	11	11		0.968132
1091		11	88		0.923564
1094	88			11	0.923564
1095			11	88	0.923564
1096			11	88	0.923564
1097	88	11			0.923564
1098	78	14		7	0.999974
1100			78	21	1.0
1102	85		14		0.999981
1104		85	14		0.999981
1105	14			85	0.999981
1106		21		78	1.0
1109	84			15	0.999986
1110	84		15		0.999986
1114		84	15		0.999986
1116		15		84	0.999986
1117	15		84		0.999986
1118		15	84		0.999986
1119		84		15	0.999986
1120	83	16			0.999991
1124		15	5	80	1.0
1126		90	10		0.999898
1131	10			90	0.999898
1357	90	10			0.999898
1361	90		10		0.999898
1364		11		88	0.999937
1367			11	88	0.999937
1368			11	88	0.999937
1375		10	85		0.999793
1521		12		87	0.992554
1522	87		12		0.992554
1523		87		12	0.992554
1524	87	12			0.992554
1526			87	12	0.992554
1530	87	12			0.992554
1535	87		12		0.992554
1537		12		87	0.992554
1539	85	14			0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain