SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene16559

Length: 818 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene16559

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16248	10/11

Source	Descriptions	Term	Type	Identity
AutoFact	Thaumatin-like protein S1 n=2 Tax=Pinus monticola RepID=D3IZ11_PINMO	-	-	92%
FL-Next	tr=Thaumatin-like protein S1; Pinus monticola (Western white pine) (Strobus monticola).	-	-	92%
Blast2go	thaumatin-like protein	-	-	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	Thaumatin, pathogenesis-related	IPR001938	-	0.0	-
Sma3	Thaumatin, conserved site	IPR017949	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 49)

Position	A %	C %	G %	T %	Probability
162		14		85	0.993533
163	28		71		1.0
164	85			14	0.993533
165			14	85	0.993533
167		14		85	0.993533
170	85		14		0.993533
171	85		14		0.993533
175			14	85	0.993533
177		14	85		0.993533
178	14			85	0.993533
181		14		85	0.993533
182	14	85			0.993533
192	71	28			1.0
247	66			33	1.0
272		33		66	1.0
280	20		80		0.995493
283			20	80	0.995493
325		20		80	0.995493
343			25	75	0.996473
344			75	25	0.996473
347		25		75	0.996473
348		25	75		0.996473
349		75		25	0.996473
352		75	25		0.996473
358	25		75		0.996473
359	75	25			0.996473
361		25	75		0.996473
362	25	75			0.996473
403	14		85		0.993533
405		14	85		0.993533
406		85	14		0.993533
408		85	14		0.993533
410		14	85		0.993533
416		85	14		0.993533
417	28		71		1.0
420		85	14		0.993533
424	14		85		0.993533
425		14	85		0.993533
426	85			14	0.993533
465		71	28		1.0
482	33			66	1.0
513		33		66	1.0
519		66		33	1.0
520	66	33			1.0
540	16	83			0.994512
542			83	16	0.994512
544	83	16			0.994512
608		20	80		0.995493
609	80		20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain