SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene16450

Length: 1162 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene16450

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene24989	18/77
SustainPine v2.0	sp_v2.0_unigene60258	53/77

Source	Descriptions	Term	Type	Identity
AutoFact	3.1.2 inositol monophosphatase n=3 Tax=Phaseoleae RepID=C1LZ50_PHAVU	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	l-galactose-1-phosphate phosphatase	-	-	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Inositol-phosphate phosphatase.	EC:3.1.3.25	-	0.0	84%

Source	KEGGs	Term	Identity
Blast2go	Inositol phosphate metabolism	00562	84%
Blast2go	Metabolic pathways	01100	84%
Blast2go	Biosynthesis of secondary metabolites	01110	84%
Blast2go	Phosphatidylinositol signaling system	04070	84%

Source	GOs	Term	Type	Identity
Blast2go	response to cold	GO:0009409	Biological Process	84%
Blast2go	L-ascorbic acid biosynthetic process	GO:0019853	Biological Process	84%
Blast2go	inositol biosynthetic process	GO:0006021	Biological Process	84%
Blast2go	L-galactose-1-phosphate phosphatase activity	GO:0010347	Molecular Function	84%
Blast2go	inositol monophosphate 1-phosphatase activity	GO:0008934	Molecular Function	84%
Blast2go	plasma membrane	GO:0005886	Cellular Component	84%
Blast2go	response to karrikin	GO:0080167	Biological Process	84%

Source	InterPros	Term	Type	e value	Identity
Sma3	Inositol monophosphatase	IPR000760	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NKB3

Fln msg:

Fln protein: MGDCDELSEFLSSAVEVAKRAGEMIGTNFYKEKSVEHKGKVDLVTETDKACEELAFQFLKEKYPEHKFIGEETSAVHGTDDLTDAPTWIIDPVDGTTNFVHRFPFVCISIGLTIGKVPTVGVVYNPIVGELFTAIRGRGAFLNGNPISASSQTELGNALLAAEIGTKRDKETVDITTNRINRLLFKVRSLRMSGSCALNLCGVACGRLDITYELGFGGPWDVAAGVVIIQEAGGCVFDPSGDEVDIMSRRIAASNGFLKEEFVDELKSLCV*

Protein Length: 273

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACGGTAGAAAGGCTACGTCGTGACCTTGGCTGTCACTCAAGATCTCTTCTCTGAACCTTCAAAAGAACCCTCCTCCAACTCCTTTTACTTTGTCTGTTTAACGATTGAAA_-_ATGGGGGACTGCGACGAGCTGAGTGAATTTCTTTCTTCTGCTGTGGAGGTCGCAAAAAGAGCTGGGGAGATGATTGGGACAAATTTTTACAAAGAGAAATCCGTGGAACACAAAGGAAAGGTAGATTTAGTAACAGAGACTGATAAGGCCTGTGAGGAGCTTGCGTTCCAGTTCCTGAAGGAAAAATACCCAGAACATAAGTTCATTGGCGAAGAAACTTCTGCAGTTCATGGAACTGACGATTTAACTGATGCACCCACCTGGATAATCGACCCTGTGGATGGAACCACGAATTTTGTTCACAGGTTTCCTTTTGTCTGCATTTCAATTGGGCTTACGATTGGAAAGGTTCCAACTGTGGGTGTTGTTTACAATCCAATAGTTGGTGAGTTGTTTACAGCTATCCGTGGAAGGGGTGCTTTTCTTAATGGGAACCCTATAAGTGCATCTTCTCAGACTGAGTTGGGGAATGCGCTTCTTGCAGCTGAGATTGGTACAAAGCGGGATAAAGAAACTGTTGACATCACTACAAATAGGATTAACAGGCTACTTTTCAAGGTACGGTCATTACGTATGTCTGGCTCTTGTGCTCTTAACCTCTGTGGAGTAGCATGTGGGAGGCTTGATATTACCTACGAGCTTGGATTTGGAGGTCCCTGGGATGTCGCTGCTGGGGTTGTAATAATTCAGGAGGCTGGTGGCTGCGTCTTTGATCCGTCAGGAGATGAGGTCGACATTATGTCACGGCGGATTGCAGCATCTAATGGATTTCTGAAAGAGGAATTTGTGGATGAGCTAAAATCATTATGTGTATGA___CATAATATTTTGTTGGAGAATTTTGCGGCACCTTTGTTGCTGAAGTAATCATTGTTATGCATCGAACAGATTTTATCGAACTATTTTCTAAAGCTCGTTTCCAATTATTTAGCAAAACCTCTTATCTTGCCCCTTTTTTTTGTTATTCATCTTTTATGGAGCTTCACTATGTATGACCAGAATCTTCTACATATGGAGCTTCAGTATGTTGC

Fln Alignment:

Contig16450___MGDCDELSEFLSSAVEVAKRAGEMIGTNFYKEKSVEHKGKVDLVTETDKACEELAFQFLKEKYPEHKFIGEETSAVHGTDDLTDAPTWIIDPVDGTTNFVHRFPFVCISIGLTIGKVPTVGVVYNPIVGELFTAIRGRGAFLNGNPISASSQTELGNALLAAEIGTKRDKETVDITTNRINRLLFKVRSLRMSGSCALNLCGVACGRLDITYELGFGGPWDVAAGVVIIQEAGGCVFDPSGDEVDIMSRRIAASNGFLKEEFVDELKSLCV
A9NKB3________________MGDCDELSGFLSSAVEVAKRAGEMIATNFYKEKSVEHKGKVDLVTETDKACEELAFQFLKQKYPEHKFIGEETSAVHGTDDLTDAPTWIIDPVDGTTNFVHRFPFVCISIGLTIGKVPTVGVVYNPIIGELFTAIRGRGAFLNGSPISSSSQTELGSALLAAEIGTKRDKETVDITTNRINGLLFKVRSLRMSGSCALNLCGVACGRLDITYELGFGGPWDVAAGVVIIQEAGGCVFDPSGDEVNIMSQRIAASNGYLKEEFLDELKASCV

SNPs (tot: 81)

Position	A %	C %	G %	T %	Probability
331	90		10		0.90298
334	90	10			0.90298
337	10			90	0.90298
339	90	10			0.90298
345			90	10	0.90298
346	90		10		0.90298
347	90			10	0.90298
348		10	90		0.90298
350	90	10			0.90298
351	90			10	0.90298
395		88		11	0.923564
397		11	88		0.923564
399	88	11			0.923564
423	87			12	0.992554
424		85		14	0.993533
426	85		14		0.993533
427	85	14			0.993533
429			16	83	0.994512
431		16		83	0.994512
432	16		83		0.994512
433		16		83	0.994512
438	85			14	0.993533
439		14	85		0.993533
442			14	85	0.993533
443	14			85	0.993533
448		14		85	0.993533
454		12	87		0.992554
455	12	87			0.992554
491		11		88	0.923564
495		11	88		0.923564
499	11			88	0.923564
500		11		88	0.923564
501		11	88		0.923564
504			11	88	0.923564
505	88		11		0.923564
507	88			11	0.923564
508	88		11		0.923564
512	88			11	0.923564
513	88	11			0.923564
514	11			88	0.923564
558	11	88			0.923564
637		11	88		0.923564
643	88			11	0.923564
644	88	11			0.923564
646	88	11			0.923564
657	88		11		0.923564
661		88	11		0.923564
664		88	11		0.923564
666	88	11			0.923564
667	88	11			0.923564
669	88			11	0.923564
672	88	11			0.923564
675	88	11			0.923564
679			88	11	0.923564
680		11	88		0.923564
681	11	88			0.923564
692		23	76		1.0
699	23			76	1.0
701	69	30			1.0
704	69		15		0.999985
705		76	15		0.999983
706		15	84		0.999986
708	75	8	16		0.99999
710		16	83		0.999991
711	16			83	0.999991
714	6		90	3	0.997544
716	6	93			0.999264
727			5	94	0.998744
729	94		5		0.998744
737	2			91	0.995208
739		5	94		0.998744
740	94			5	0.998744
744			94	5	0.998744
783		16	83		1.0
785	83	2		13	1.0
786		13	83	2	1.0
789	13	86			1.0
793			86	13	1.0
796	86	13			1.0
801	13		86		1.0
1140	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain