SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene16362

Length: 850 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene16362

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene22511	4/11
SustainPine v2.0	sp_v2.0_unigene29136	7/11

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	87%
Blast2go	protein chloroplastic-like	-	-	65%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF677	IPR007749	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 35)

Position	A %	C %	G %	T %	Probability
52	80	20			0.995493
53			20	80	0.995493
54		80		20	0.995493
56			20	80	0.995493
60	80	20			0.995493
61		20		80	0.995493
68	80	20			0.995493
69	80			20	0.995493
74		20	80		0.995493
76		20		80	0.995493
77	20			80	0.995493
435	33	33		33	0.997753
438	33	66			1.0
439	33		33		0.997753
440		33	66		0.997452
441	33			66	1.0
442		66	33		0.997452
443	33	66			1.0
444		33		66	0.997452
445		33		66	0.997452
449		66	33		0.997452
453		12		87	0.992554
456		25		75	1.0
457	12		87		0.992554
458		12		87	0.992554
459			12	87	0.992554
460	12		75		0.975346
462	12	87			0.992554
465			12	87	0.992554
466			12	87	0.992554
467		12		87	0.992554
468	87			12	0.992554
470		87		12	0.992554
472	12	87			0.992554
473		12		87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain