SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene16144

Length: 629 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene16144

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene5903	8/10

Source	Descriptions	Term	Type	Identity
AutoFact	enhanced disease susceptibility 1 protein [Solanum tuberosum]	-	-	34%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	63%
Blast2go	enhanced disease susceptibility 1	-	-	55%

Source	ECs	Term	Type	e value	Identity
Blast2go	Triacylglycerol lipase.	EC:3.1.1.3	-	0.0	55%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Glycerolipid metabolism	00561		0.0	55%
Blast2go	Metabolic pathways	01100		0.0	55%

Source	GOs	Term	Type	e value	Identity
Blast2go	lipid metabolic process	GO:0006629	Biological Process	0.0	55%
Blast2go	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	55%

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 40)

Position	A %	C %	G %	T %	Probability
52	66	33			0.997452
54			66	33	0.997452
56			33	66	0.997452
61		33		66	0.997452
63	66			33	0.997452
64			33	66	0.997452
65	66		33		0.997452
66	66	33			0.997452
74		33	66		0.997452
75			66	33	0.997452
76		33	66		0.997452
77	33		66		0.997452
219		16	83		0.994512
220		83	16		0.994512
221	83			16	0.994512
224	83	16			0.994512
225	83	16			0.994512
227		83		16	0.994512
228	83		16		0.994512
229	83		16		0.994512
231		83	16		0.994512
234	16			83	0.994512
237	16	83			0.994512
241			14	85	0.993533
242		85		14	0.993533
248	11			88	0.923564
249		11		88	0.923564
250	88	11			0.923564
256	88			11	0.923564
258			88	11	0.923564
263	11	88			0.923564
311	90	10			0.90298
314	90	10			0.90298
320		14		85	0.993533
321	85	14			0.993533
328		14		85	0.993533
329	85			14	0.993533
335	14		85		0.993533
338		14	85		0.993533
339	14			85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain