SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene16075

Length: 750 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene16075

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14414	61/69
SustainPine v2.0	sp_v2.0_unigene65770	2/69

Source	Descriptions	Term	Type	Identity
AutoFact	pyridoxal phosphate dependent transferase-like protein [Arabidopsis thaliana] gb\|AAG52437.1\|AC018848_8 putative aspartate aminotransferase; 38163-36256 [Arabidopsis thaliana] gb\|AAM13158.1\| putative aspartate aminotransferase [Arabidopsis thaliana] gb\|AAP	-	-	66%
FL-Next	tr=Os01g0178000 protein; Oryza sativa subsp. japonica (Rice).	-	-	64%
Blast2go	transaminase transferring nitrogenous groups	-	-	82%

Source	ECs	Term	Type	e value	Identity
Blast2go	Aspartate transaminase.	EC:2.6.1.1	-	0.0	82%

Source	KEGGs	Term	Identity
Blast2go	Alanine, aspartate and glutamate metabolism	00250	82%
Blast2go	Cysteine and methionine metabolism	00270	82%
Blast2go	Arginine and proline metabolism	00330	82%
Blast2go	Tyrosine metabolism	00350	82%
Blast2go	Phenylalanine metabolism	00360	82%
Blast2go	Phenylalanine, tyrosine and tryptophan biosynthesis	00400	82%
Blast2go	Carbon fixation in photosynthetic organisms	00710	82%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	82%
Blast2go	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	82%
Blast2go	Biosynthesis of phenylpropanoids	01061	82%
Blast2go	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	82%
Blast2go	Biosynthesis of plant hormones	01070	82%
Blast2go	Metabolic pathways	01100	82%
Blast2go	Biosynthesis of secondary metabolites	01110	82%

Source	GOs	Term	Type	Identity
Blast2go	biosynthetic process	GO:0009058	Biological Process	82%
Blast2go	pyridoxal phosphate binding	GO:0030170	Molecular Function	82%
Blast2go	L-aspartate:2-oxoglutarate aminotransferase activity	GO:0004069	Molecular Function	82%

Source	InterPros	Term	Type	Identity
Sma3	1-aminocyclopropane-1-carboxylate synthase	IPR001176	-	-
Sma3	Aminotransferases, class-I, pyridoxal-phosphate-binding site	IPR004838	-	-
Sma3	Aminotransferase, class I/classII	IPR004839	-	-
Sma3	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	IPR015421	-	-
Sma3	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	IPR015422	-	-

Full-Lengther Next Prediction

SNPs (tot: 25)

Position	A %	C %	G %	T %	Probability
176	85	14			1.0
179		9	90		0.999872
181	85	4			0.999726
182			85	14	1.0
187	90			9	0.999872
190	16	3	77		1.0
194	6		93		0.999264
205	48		51		1.0
281	91			8	1.0
282	91	2		5	0.995912
285		5	94		0.998894
286	94			5	0.998894
287	91	2	5		0.995912
291	6			93	0.999998
292		6	8	85	1.0
296		4		91	0.908347
300	93	2	4		0.976545
301	95		4		0.995482
302		4		93	0.979066
304			4	95	0.995881
309		4	95		0.996252
310			95	4	0.996252
311	95	4			0.996252
312	4		95		0.996252
357		4	95		0.995482

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain