SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene15906

Length: 578 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene15906

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene771	23/24

Source	Descriptions	Term	Type	Identity
AutoFact	uncharacterized protein [Arabidopsis thaliana] emb\|CAB83113.1\| putative protein [Arabidopsis thaliana] gb\|AAO41871.1\| unknown protein [Arabidopsis thaliana] gb\|AAO50669.1\| unknown protein [Arabidopsis thaliana] gb\|AEE80373.1\| uncharacterized protein [Arab	-	-	39%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	70%
Blast2go	calmodulin binding protein	-	-	55%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF1645	IPR012442	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 33)

Position	A %	C %	G %	T %	Probability
147		33		66	0.997452
149		33	66		0.997452
152	66	33			0.997452
153		66		33	0.997452
154	33	66			0.997452
155			33	66	0.997452
156	33			66	0.997452
157	33		66		0.997452
159	33	66			0.997452
160			33	66	0.997452
162	33			33	0.997753
164	33	33		33	0.997753
166	66			33	0.997452
168	66			33	0.997452
169	33	33		33	0.997753
170	33		66		0.997452
180	85			14	0.993533
182	14		71	14	0.984337
183	85	14			0.993533
184	14		85		0.993533
231	87	12			0.992554
233	87			12	0.992554
239		12		87	0.992554
242		87		12	0.992554
243		87	12		0.992554
297	87		8	4	0.999414
300	87	4	8		0.999414
304	87	8		4	0.999414
306		8	91		0.999766
307	8		91		0.999766
365		41	58		1.0
473		66		25	1.0
519		28	71		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain