SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene15890

Length: 805 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene15890

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6944	42/43

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF588 multi-domain protein	-	-	8.0e-29	31%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	casp-like protein at2g28370	-	-	0.0	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	77%

Source	InterPros	Term	Type	e value	Identity
Sma3	Uncharacterised protein family UPF0497, trans-membrane plant	IPR006702	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 26)

Position	A %	C %	G %	T %	Probability
126	83	16			0.994512
128	83	16			0.994512
131	83		16		0.994512
133		16	83		0.994512
134	83	16			0.994512
135	83			16	0.994512
139	83			16	0.994512
144	16			83	0.994512
287	80	13	6		0.999961
288			73	20	1.0
289		86		13	0.999973
291	73		13	13	0.999956
298		13	6	80	0.999961
301	86			13	0.999973
350		69		30	1.0
360	80			20	1.0
362	6	18		75	1.0
365	75			25	1.0
366		75	18	6	1.0
368	80	20			1.0
369	73	6		20	1.0
370	73		20	6	1.0
374	14	85			0.999981
377		14		85	0.999981
378	14	85			0.999981
679	62		37		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain