UniGene Name: uagpf_v2_unigene15854
Length: 248 nt
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>uagpf_v2_unigene15854
C |
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Parent Assembly | Parent UniGene | Reads (related/total) |
---|---|---|
SustainPine v2.0 | sp_v2.0_unigene1265 | 17/26 |
SustainPine v2.0 | sp_v2.0_unigene23280 | 2/26 |
SustainPine v2.0 | sp_v2.0_unigene78042 | 2/26 |
SustainPine v2.0 | sp_v2.0_unigene79584 | 4/26 |
Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN | - | - | 0.0 | 54% |
Blast2go | abscisic acid receptor pyr1 | - | - | 0.0 | 71% |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Blast2go | abscisic acid mediated signaling pathway | GO:0009738 | Biological Process | 0.0 | 71% |
Blast2go | receptor activity | GO:0004872 | Molecular Function | 0.0 | 71% |
Blast2go | protein homodimerization activity | GO:0042803 | Molecular Function | 0.0 | 71% |
Blast2go | abscisic acid binding | GO:0010427 | Molecular Function | 0.0 | 71% |
Blast2go | regulation of protein serine/threonine phosphatase activity | GO:0080163 | Biological Process | 0.0 | 71% |
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Fln status: Putative coding
Fln database: testcode
Fln msg:
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
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Position | A % | C % | G % | T % | Probability |
---|---|---|---|---|---|
81 | 12 | 87 | 0.992554 | ||
84 | 87 | 12 | 0.992554 | ||
85 | 87 | 12 | 0.992554 | ||
86 | 87 | 12 | 0.992554 | ||
88 | 12 | 87 | 0.992554 | ||
89 | 12 | 87 | 0.992554 | ||
96 | 81 | 18 | 1.0 | ||
100 | 6 | 12 | 81 | 0.999943 |
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Start position | End position | Sequence | Length |
---|---|---|---|
48 | 67 | TCCACA TCCACA TCCACA TC | 20 |
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain