SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene15832

Length: 1016 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene15832

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene20	26/29

Source	Descriptions	Term	Type	Identity
AutoFact	Cysteine proteinases-like protein [Arabidopsis thaliana] dbj\|BAD43054.1\| unknown protein [Arabidopsis thaliana] gb\|AEE79704.1\| Cysteine proteinases-like protein [Arabidopsis thaliana]	-	-	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	protein	-	-	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	71%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ovarian tumour, otubain	IPR003323	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 39)

Position	A %	C %	G %	T %	Probability
52		33	66		0.997452
53	66		33		0.997452
57	66			33	0.997452
59	33		66		0.997452
61	66	33			0.997452
64	33	33		33	0.997753
65			33	66	0.997452
66		66	33		0.997452
67	66	33			0.997452
70			66	33	0.997452
71	66	33			0.997452
73	66	33			0.997452
74			66	33	0.997452
75	66	33			0.997452
203	83	16			0.994512
205		83		16	0.994512
206	83	16			0.994512
212	83	16			0.994512
220			83	16	0.994512
246	87	12			0.992554
248			87	12	0.992554
254	87	12			0.992554
255			87	12	0.992554
256	87			12	0.992554
258	87		12		0.992554
260	87			12	0.992554
263	87	12			0.992554
265		12	87		0.992554
266	12		87		0.992554
349		80		20	0.995493
462	20	20	60		0.99255
465			20	80	0.995493
466			20	80	0.995493
467		20	80		0.995493
469	80		20		0.995493
474		16	83		0.994512
475	16		83		0.994512
601		75		25	1.0
654	88		11		0.999937

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain