SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene15688

Length: 703 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene15688

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene4232	23/24

Source	Descriptions	Term	Type	Identity
AutoFact	Tyrosine specific protein phosphatase family protein n=2 Tax=Zea mays RepID=B6TFU8_MAIZE	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	63%
Blast2go	tyrosine specific protein phosphatase family protein	-	-	78%

Source	ECs	Term	Type	e value	Identity
Blast2go	Protein-tyrosine-phosphatase.	EC:3.1.3.48	-	0.0	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	peptidyl-tyrosine dephosphorylation	GO:0035335	Biological Process	0.0	78%
Blast2go	protein tyrosine phosphatase activity	GO:0004725	Molecular Function	0.0	78%

Source	InterPros	Term	Type	Identity
Sma3	Protein-tyrosine/Dual-specificity phosphatase	IPR000387	-	-
Sma3	Zinc finger, RING-type	IPR001841	-	-
Sma3	Protein-tyrosine phosphatase, SIW14-like	IPR004861	-	-
Sma3	Protein-tyrosine phosphatase, active site	IPR016130	-	-
Sma3	Peptidase S1/S6, chymotrypsin/Hap, active site	IPR018114	-	-
Sma3	Zinc finger, C3HC4 RING-type	IPR018957	-	-

Full-Lengther Next Prediction

SNPs (tot: 48)

Position	A %	C %	G %	T %	Probability
41	66			33	0.997452
42		33	66		0.997452
44	66			33	0.997452
45	66		33		0.997452
46	33			66	0.997452
48	66	33			0.997452
51		66		33	0.997452
52	66		33		0.997452
54		33		66	0.997452
56		66	33		0.997452
58	66	33			0.997452
60		33		66	0.997452
70	60	40			1.0
72	60			40	1.0
73	60	40			1.0
75			60	40	1.0
79	60	40			1.0
80	60			40	1.0
81			60	40	1.0
82		60	40		1.0
85		60		40	1.0
91	60			20	0.99255
92	60	20		20	0.99255
93	20	20	60		0.99255
94	20			80	0.995493
140	75		25		1.0
141	75			25	1.0
147	25			75	1.0
148		25		75	1.0
150			75	25	1.0
151	75			25	1.0
155	75			25	1.0
156	75		25		1.0
161		87		12	0.992554
162	87	12			0.992554
180	80	20			0.999996
183		90		10	0.90298
184			10	90	0.90298
186	90	10			0.90298
189		10		90	0.90298
190		20	80		0.999996
192		10		90	0.90298
193	10		90		0.90298
195	90	10			0.90298
197			10	90	0.90298
202	90	10			0.90298
204		10		90	0.90298
205	10			90	0.90298

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain