SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene14937

Length: 599 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene14937

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene19494	23/27
SustainPine v2.0	sp_v2.0_unigene68393	3/27

Source	Descriptions	Term	Type	Identity
AutoFact	Prolyl endopeptidase, putative n=1 Tax=Ricinus communis RepID=B9R8I0_RICCO	-	-	72%
FL-Next	tr=Prolyl endopeptidase, putative; Ricinus communis (Castor bean).	-	-	72%
Blast2go	prolyl oligopeptidase-like protein	-	-	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast	GO:0009507	Cellular Component	0.0	84%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S9, prolyl oligopeptidase, catalytic domain	IPR001375	-	-
Sma3	Peptidase S9A, prolyl oligopeptidase	IPR002470	-	-
Sma3	Peptidase S9, serine active site	IPR002471	-	-
Sma3	Peptidase S9A/B/C, oligopeptidase, N-terminal beta-propeller	IPR004106	-	-
Sma3	Ribosomal protein S2, conserved site	IPR018130	-	-

Full-Lengther Next Prediction

SNPs (tot: 28)

Position	A %	C %	G %	T %	Probability
121	11	88			0.999937
130		10	89		0.999919
136	86	9		4	0.999642
138	86	9			0.999642
139	90			9	0.999842
155		61		38	1.0
179	33		66		1.0
270	90		9		0.999872
272		9	90		0.999872
274			90	9	0.999872
276	9			90	0.999872
277		10	90		0.999898
421	90		10		0.90298
425		10	90		0.90298
426	90		10		0.90298
428	10	90			0.90298
429	90		10		0.90298
431		90	10		0.90298
432	10	90			0.90298
433			10	90	0.90298
434	90			10	0.90298
437		10		90	0.90298
439			11	88	0.923564
445	11			88	0.923564
446		88	11		0.923564
447	11	88			0.923564
448	88	11			0.923564
450			11	88	0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain