SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene14735

Length: 631 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene14735

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17851	14/15

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cytochrome P450 716B2 n=2 Tax=Picea sitchensis RepID=C16B2_PICSI	-	-	3.9937e-43	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	69%
Blast2go	cytochrome p450 family protein	-	-	0.0	78%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	Hemocyanin, copper-type	IPR000896	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Integrase, catalytic core	IPR001584	-	-
Sma3	Cytochrome P450, B-class	IPR002397	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	HAT dimerisation	IPR008906	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
252	85	14			0.993533
253	85		14		0.993533
255		14	85		0.993533
257	85		14		0.993533
259	85	14			0.993533
260		14		85	0.993533
261	85			14	0.993533
262		85		14	0.993533
263			14	85	0.993533
265	85	14			0.993533
267			14	85	0.993533
269		14		85	0.993533
270	14			85	0.993533
273		14	85		0.993533
274	14	85			0.993533
288		25	75		1.0
291			10	90	0.90298
293			10	90	0.90298
294	10			90	0.90298
295	90	10			0.90298
296	90	10			0.90298
297	90			10	0.90298
301		10	90		0.90298
302	90			10	0.90298
305		10		90	0.90298
307		10	90		0.90298
309		10	90		0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain