SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene14720

Length: 762 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene14720

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene25450	16/17

Source	Descriptions	Term	Type	Identity
AutoFact	RecName: Full=Pleiotropic drug resistance protein 2; AltName: Full=NpPDR2 emb\|CAH40786.1\| PDR-like ABC transporter [Nicotiana plumbaginifolia]	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	71%
Blast2go	pleiotropic drug resistance protein 2-like	-	-	80%

Source	InterPros	Term	Type	Identity
Sma3	Ribosomal protein L11	IPR000911	-	-
Sma3	DNA methylase, N-6 adenine-specific, conserved site	IPR002052	-	-
Sma3	Proteinase inhibitor I2, Kunitz metazoa	IPR002223	-	-
Sma3	ABC transporter-like	IPR003439	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ATPase, AAA-type, core	IPR003959	-	-
Sma3	Pleiotropic drug resistance protein PDR	IPR005285	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	ABC-2 type transporter	IPR013525	-	-
Sma3	Plant PDR ABC transporter associated	IPR013581	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3	Peptidase S26A, signal peptidase I, serine active site	IPR019756	-	-

Full-Lengther Next Prediction

SNPs (tot: 53)

Position	A %	C %	G %	T %	Probability
38	42		57		1.0
40		57	42		1.0
46	42	57			1.0
47	42	57			1.0
52		42	57		1.0
53	42		57		1.0
55	42			57	1.0
57			42	57	1.0
58		57	42		1.0
59	57			42	1.0
60		57		42	1.0
61	42			57	1.0
62		57	42		1.0
163	87		12		0.992554
165			12	87	0.992554
172		12	87		0.992554
175			12	87	0.992554
177	87	12			0.992554
183		12		87	0.992554
270		77	22		0.999999
274	77			22	0.999999
277		22	77		0.999999
278	77	22			0.999999
279	77			22	0.999999
280	77			22	0.999999
283		22	77		0.999999
284		77		22	0.999999
285	77		22		0.999999
287		22		77	0.999999
288	22		77		0.999999
291		22	77		0.999999
292	88			11	0.923564
293	11			88	0.923564
339		11	88		0.923564
340	11	88			0.923564
346	33		66		1.0
392		11		88	0.923564
393			11	88	0.923564
399	11			88	0.923564
401	88	11			0.923564
402		10		90	0.90298
403			10	90	0.90298
404			10	90	0.90298
405		90	10		0.90298
410	90	10			0.90298
411	11	11	77		0.968132
412		22	77		0.999999
414		88		11	0.923564
415	88		11		0.923564
422	11			88	0.923564
423		11	88		0.923564
425	87	12			0.992554
426	12		87		0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain