SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene14688

Length: 988 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene14688

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9380	14/23
SustainPine v2.0	sp_v2.0_unigene78798	5/23

Source	Descriptions	Term	Type	e value	Identity
AutoFact	rhodanese-like protein [Holcus lanatus]	-	-	1.0e-39	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Blast2go	dual specificity phosphatase cdc25	-	-	0.0	77%

Source	ECs	Term	Type	e value	Identity
Blast2go	Protein-tyrosine-phosphatase.	EC:3.1.3.48	-	0.0	77%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	77%
Blast2go	response to arsenic-containing substance	GO:0046685	Biological Process	77%
Blast2go	peptidyl-tyrosine dephosphorylation	GO:0035335	Biological Process	77%
Blast2go	protein tyrosine phosphatase activity	GO:0004725	Molecular Function	77%
Blast2go	arsenate reductase activity	GO:0030611	Molecular Function	77%
Blast2go	chloroplast	GO:0009507	Cellular Component	77%
Blast2go	mitochondrion	GO:0005739	Cellular Component	77%

Source	InterPros	Term	Type	e value	Identity
Sma3	Rhodanese-like	IPR001763	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 63)

Position	A %	C %	G %	T %	Probability
108		50		50	1.0
179	80	20			0.995493
180			20	80	0.995493
183		80	20		0.995493
184	80			20	0.995493
187		20		80	0.995493
192			20	80	0.995493
195	80			20	0.995493
198	80	20			0.995493
203		20	80		0.995493
204	20		80		0.995493
209	71	14			0.984337
210	85		14		0.993533
211	85			14	0.993533
212	85	14			0.993533
214	85			14	0.993533
215		85	14		0.993533
218		14		85	0.993533
223		14		85	0.993533
225			14	85	0.993533
234		14	85		0.993533
235	14	85			0.993533
311	81		18		0.999994
314		81		18	0.999994
315	81		18		0.999994
317		18		81	0.999994
318	81	18			0.999994
322	81		18		0.999994
324	81	18			0.999994
325	81			18	0.999994
327	81			18	0.999994
328		18		81	0.999994
329	18			81	0.999994
353		81		18	0.999994
374	15		84		0.999986
466			83	16	0.999991
620	87	12			0.992554
621			12	87	0.992554
624	12			87	0.992554
625	87	12			0.992554
630	87			12	0.992554
632			87	12	0.992554
633	87	12			0.992554
634	12			87	0.992554
635		12	87		0.992554
636			87	12	0.992554
637	87	12			0.992554
653		12		87	0.992554
655			87	12	0.992554
657	87		12		0.992554
658	87			12	0.992554
661		12	87		0.992554
662	87			12	0.992554
663	87			12	0.992554
664	87		12		0.992554
668	87		12		0.992554
670		14	85		0.993533
672		14		85	0.993533
674		14	85		0.993533
677			33	50	1.0
721	60		40		1.0
779		33		66	0.997452
780		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain