SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene14646

Length: 632 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene14646

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3939	13/18
SustainPine v2.0	sp_v2.0_unigene62825	2/18

Source	Descriptions	Term	Type	Identity
AutoFact	mitochondrial import inner membrane translocase subunit Tim17 [Arabidopsis thaliana] ref\|NP_973621.1\| mitochondrial import inner membrane translocase subunit Tim17 [Arabidopsis thaliana] sp\|Q9SP35.2\|TIM17_ARATH RecName: Full=Mitochondrial import inner mem	-	-	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	83%
Blast2go	mitochondrial import inner membrane translocase subunit tim17	-	-	71%

Source	GOs	Term	Type	Identity
Blast2go	protein transport	GO:0015031	Biological Process	71%
Blast2go	protein transporter activity	GO:0008565	Molecular Function	71%
Blast2go	mitochondrial inner membrane presequence translocase complex	GO:0005744	Cellular Component	71%
Blast2go	integral to membrane	GO:0016021	Cellular Component	71%
Blast2go	mitochondrial outer membrane	GO:0005741	Cellular Component	71%

Source	InterPros	Term	Type	e value	Identity
Sma3	DNA methylase, N-6 adenine-specific, conserved site	IPR002052	-	0.0	-
Sma3	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24	IPR003397	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 48)

Position	A %	C %	G %	T %	Probability
80	66		33		0.997452
81			66	33	0.997452
82		66	33		0.997452
84		33	66		0.997452
86	66			33	0.997452
87	66			33	0.997452
92			66	33	0.997452
98	66			33	0.997452
107		25		75	0.996473
109	75			25	0.996473
110	75	25			0.996473
111			25	75	0.996473
113		75	25		0.996473
114	25			75	0.996473
116	75	25			0.996473
117	75			25	0.996473
118	75			25	0.996473
120		42	57		1.0
121	42	14	42		1.0
123	42	42	14		1.0
124			85	14	0.993533
126		57	42		1.0
131		57		42	1.0
132	57		42		1.0
138	71	28			1.0
139	28			71	1.0
140	14	28	57		1.0
229		86		13	0.999973
231	86		13		0.999973
232	86			13	0.999973
235		13	86		0.999973
237			86	13	0.999973
238	86			13	0.999973
240	86		13		0.999973
241	86	13			0.999973
243			13	86	0.999973
245		13	86		0.999973
246	13		86		0.999973
247	86	13			0.999973
261	88		11		0.999937
262			88	11	0.999937
268	11	88			0.999952
269		11		88	0.999952
271		88		11	0.999952
273		88	11		0.999952
278		11	88		0.999952
279	11	88			0.999952
335	50		50		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain