SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene14584

Length: 897 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene14584

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3863	40/43

Source	Descriptions	Term	Type	e value	Identity
AutoFact	papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana]	-	-	5.0e-20	49%
FL-Next	tr=Pseudotzain; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii).	-	-	0.0	46%
Blast2go	protein	-	-	9.01298e-26	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	cysteine-type peptidase activity	GO:0008234	Molecular Function	9.01298e-26	63%
Blast2go	vacuole	GO:0005773	Cellular Component	9.01298e-26	63%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	9.01298e-26	63%

Full-Lengther Next Prediction

SNPs (tot: 41)

Position	A %	C %	G %	T %	Probability
74		25		75	0.996473
77		25		75	0.996473
83	75	25			0.996473
87			25	75	0.996473
88	75	25			0.996473
89		75		25	0.996473
90	75		25		0.996473
94		25		75	0.996473
384		11	88		0.923564
385	88		11		0.923564
387		11		88	0.923564
389		88	11		0.923564
394	88			11	0.923564
395	88			11	0.923564
398	88		11		0.923564
399	88	11			0.923564
409		10		90	0.90298
414			11	88	0.923564
415		88		11	0.923564
416	87		12		0.992554
418	87	12			0.992554
420	87			12	0.992554
421			87	12	0.992554
422	87		12		0.992554
424	87	12			0.992554
425	87			12	0.992554
426	87		12		0.992554
427	87			12	0.992554
428		12	87		0.992554
473	91		8		0.999766
475		12		87	1.0
482			8	91	0.999766
484	91			8	0.999766
485	91		8		0.999766
486		3	88	7	0.999079
487	88	7	3		0.999079
488	7			92	0.999664
491		7	92		0.999664
492	7			88	0.999079
494		7		92	0.999664
499	92		8		0.999718

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain