SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene14525

Length: 828 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene14525

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9755	22/22

Source	Descriptions	Term	Type	Identity
AutoFact	Peroxisomal biogenesis factor 11 [Medicago truncatula]	-	-	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	peroxisomal biogenesis factor 11 family protein	-	-	87%

Source	GOs	Term	Type	Identity
Blast2go	peroxisome fission	GO:0016559	Biological Process	87%
Blast2go	identical protein binding	GO:0042802	Molecular Function	87%
Blast2go	integral to peroxisomal membrane	GO:0005779	Cellular Component	87%
Blast2go	chloroplast	GO:0009507	Cellular Component	87%
Blast2go	mitochondrion	GO:0005739	Cellular Component	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	Peroxisomal biogenesis factor 11	IPR008733	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 32)

Position	A %	C %	G %	T %	Probability
25	33		66		0.997452
26	33			66	0.997452
27	33		66		0.997452
31		66	33		0.997452
34		33		66	0.997452
35			66	33	0.997452
44	33			66	0.997452
46	66			33	0.997452
116		80	20		0.995493
118		20		80	0.995493
119	80		20		0.995493
121			20	80	0.995493
122	20			80	0.995493
126	80			20	0.995493
129	80	20			0.995493
131		80	20		0.995493
138		20		80	0.995493
386	20		80		0.995493
392			20	80	0.995493
397			80	20	0.995493
398	80			20	0.995493
400		80	20		0.995493
403			25	75	0.996473
406		25	75		0.996473
407	25			75	0.996473
408		25		75	0.996473
411	25		75		0.996473
506	77	22			0.999999
507	22	77			0.999999
679	54		45		1.0
714		54		45	1.0
748			55	44	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain