SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene14492

Length: 700 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene14492

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene5619	42/43

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[P] COG0428 Predicted divalent heavy-metal cations transporter	-	-	2.0e-13	34%
FL-Next	sp=IAA-alanine resistance protein 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	79%
Blast2go	iaa-alanine resistance protein 1	-	-	0.0	79%

Source	GOs	Term	Type	Identity
Blast2go	metal ion transport	GO:0030001	Biological Process	79%
Blast2go	transmembrane transport	GO:0055085	Biological Process	79%
Blast2go	metal ion transmembrane transporter activity	GO:0046873	Molecular Function	79%
Blast2go	membrane	GO:0016020	Cellular Component	79%

Source	InterPros	Term	Type	e value	Identity
Sma3	Zinc/iron permease	IPR003689	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 66)

Position	A %	C %	G %	T %	Probability
16		33		66	0.997452
17			33	66	0.997452
19		66	33		0.997452
21		33	66		0.997452
22	66	33			0.997452
24			66	33	0.997452
26	66		33		0.997452
27		33	66		0.997452
35	66	33			0.997452
86		40	60		1.0
87			20	80	0.995493
89		20	80		0.995493
93	20		60	20	0.99255
96	20	20	60		0.99255
97		20	60	20	0.99255
99		80	20		0.995493
102			80	20	0.995493
104	80			20	0.995493
122	71			28	1.0
124	71		28		1.0
128		28	71		1.0
135		71	28		1.0
136			28	71	1.0
138	71			14	0.984337
139			85	14	0.993533
140			85	14	0.993533
141	71	14		14	0.984337
142	14	14	71		0.984337
143	85	14			0.993533
144		14		85	0.993533
145		14		85	0.993533
146	14		71		0.984337
148		14	85		0.993533
149	14		85		0.993533
196		12		87	0.992554
197			12	87	0.992554
200			12	87	0.992554
202		87	12		0.992554
204	87	12			0.992554
207			12	87	0.992554
208		87	12		0.992554
211	87		12		0.992554
215	12		87		0.992554
217	87			12	0.992554
218		12		87	0.992554
219	12			87	0.992554
269		11	88		0.923564
271	88			11	0.923564
273	88		11		0.923564
275		11		88	0.923564
277	88			11	0.923564
279		88	11		0.923564
280	88		11		0.923564
281		11		88	0.923564
287		7	92		0.999664
288	92			7	0.999664
289		7	92		0.999664
290	7		88	3	0.999079
291		7	92		0.999664
306	7		92		0.999602
351	91		8		0.999766
355	90	9			0.999872
357		10	90		0.999898
367		7		92	0.999532
368	92		7		0.999602
460			66	33	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain