SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene14320

Length: 1136 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene14320

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene27559	111/120
SustainPine v2.0	sp_v2.0_unigene77244	4/120

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Tim17 domain containing protein	-	-	3.0e-18	24%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	amino acid selective channel protein	-	-	0.0	76%

Source	InterPros	Term	Type	e value	Identity
Sma3	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24	IPR003397	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 78)

Position	A %	C %	G %	T %	Probability
312		60		40	1.0
323	93			6	0.999364
324	84	15			1.0
325	90		9		1.0
327		9		90	1.0
331	90	9			1.0
338		9	90		1.0
341		90		3	0.996531
342		3		90	0.996531
345	6		90	3	0.996531
347		6	93		0.99903
348	6	93			0.99903
443		11		88	0.923564
444			88	11	0.923564
445	77	11		11	0.968132
446	87	12			0.992554
448		12	12	75	0.975346
463	16		83		0.994512
466		14	71		0.984337
468	71	14	14		0.984337
469			14	85	0.993533
470	71	14			0.984337
471		16		83	0.994512
474		12		87	0.992554
475		12	87		0.992554
476	12		75	12	0.975346
477	85	14			0.993533
483	85	14			0.993533
484		14		85	0.993533
485	85			14	0.993533
489	85			14	0.993533
493		14	85		0.993533
494	85			14	0.993533
495	87	12			0.992554
528			11	88	0.923564
530		11		88	0.923564
531	88		11		0.923564
532	88			11	0.923564
533			14	85	0.993533
535	80	20			0.999996
536		10	90		0.90298
543		10		90	0.90298
544			90	10	0.90298
546		10	90		0.90298
547	90		10		0.90298
551		10	90		0.90298
553			90	10	0.90298
556		18	81		1.0
557		75		25	1.0
642	92	7			0.999602
643			7	92	0.999602
646	92		7		0.999532
652		6		93	0.99903
653	87	6	6		0.990219
657		93	6		0.99903
669	5	92	2		0.991359
671		5	92		0.991359
677		94		5	0.997984
678	92	5		2	0.991359
683	92	7			1.0
684		5		94	0.9982
689			5	94	0.9982
691		94		5	0.9982
694		5	94		0.9982
696	94	5			0.9982
735	94		5		0.9982
739	94		5		0.998397
743	94	5			0.998578
744			94	5	0.998578
746	94		5		0.998578
747		94	5		0.998578
750	94			5	0.998744
751		5	94		0.998744
754	6			93	0.999364
833	90	9			0.999842
834		91		8	0.999766
835	91	8			0.999766
915		80	19		1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain