SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene13685

Length: 253 nt

UniGene Fasta

>uagpf_v2_unigene13685
CGTCGTGACCTTGGCTGTCACTCATTATTAGTGGCTGCCATTCCAAATATTATTGGGTGGCTTATCATTTTCTTCGCAAAGGATTCTTTATTTTTATACTGGGGAAGATTGTTCACAGGGTTTGGGGTTGGGGTCATCTCATTTGCTGTACCTGTATACATATCTGAGATAGCACCAAGGCACCTTCGAGGAGGTCTTGGGGCAGTAAATCAGCTCTCAGTGACAGTTGGTATTATGCTGGCATACTTGTTTG

Ace file of the UniGene uagpf_v2_unigene13685

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18452	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Putative ERD6-like transporter (Fragment) n=2 Tax=Vitis vinifera RepID=D7SPD1_VITVI	-	-	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	81%
Blast2go	sugar transporter erd6-like 6-like	-	-	81%

Source	GOs	Term	Type	e value	Identity
Blast2go	transporter activity	GO:0005215	Molecular Function	0.0	81%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	0.0	81%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase M14, carboxypeptidase A	IPR000834	-	-
Sma3	Sugar/inositol transporter	IPR003663	-	-
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Twin-arginine translocation pathway, signal sequence	IPR006311	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLK8

Fln msg: Distance to subject end: 295 aas, your sequence is shorter than subject: 84 - 502

Fln protein: RRDLGCHSLLVAAIPNIIGWLIIFFAKDSLFLYWGRLFTGFGVGVISFAVPVYISEIAPRHLRGGLGAVNQLSVTVGIMLAYLF

Protein Length: 85

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTATTAGTGGCTGCCATTCCAAATATTATTGGGTGGCTTATCATTTTCTTCGCAAAGGATTCTTTATTTTTATACTGGGGAAGATTGTTCACAGGGTTTGGGGTTGGGGTCATCTCATTTGCTGTACCTGTATACATATCTGAGATAGCACCAAGGCACCTTCGAGGAGGTCTTGGGGCAGTAAATCAGCTCTCAGTGACAGTTGGTATTATGCTGGCATACTTGTTTG

Fln Alignment:

Contig13685___SLLVAAIPNIIGWLIIFFAKDSLFLYWGRLFTGFGVGVISFAVPVYISEIAPRHLRGGLGAVNQLSVTVGIMLAYLF
B8LLK8________________ALIVAAIPNIAGWLIIAFAKNAAFLYAGRLLTGFGVGVISFTVPVYIAEIAPKHLRGSLGTVNQLSVTVGIMLAYLF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain