SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene13032

Length: 950 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene13032

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3210	29/30

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ctf8 domain containing protein	-	-	1.0e-25	42%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	63%
Blast2go	chromosome transmission fidelity protein 8	-	-	1.8623e-35	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	regulation of cellular process	GO:0050794	Biological Process	1.8623e-35	63%

Source	InterPros	Term	Type	Identity
Sma3	Post-SET domain	IPR003616	-	-
Sma3	Protein phosphatase inhibitor 2 (IPP-2)	IPR007062	-	-
Sma3	Chromosome transmission fidelity protein 8	IPR018607	-	-

Full-Lengther Next Prediction

SNPs (tot: 58)

Position	A %	C %	G %	T %	Probability
231		14		85	0.993533
234	85		14		0.993533
235	85			14	0.993533
236	85		14		0.993533
238		14		85	0.993533
242		85	14		0.993533
243	85	14			0.993533
245	85		14		0.993533
248	14		85		0.993533
249		14	85		0.993533
250	85			14	0.993533
251		14	85		0.993533
272		70		30	1.0
274	80		20		0.999996
275		10	70	20	0.999998
276			90	10	0.90298
277	90	10			0.90298
278	10	90			0.90298
280	80	20			0.999996
281			80	20	0.999996
283	80		20		0.999996
284			20	80	0.999996
287	66	16			0.999991
288			33	66	1.0
290		83	16		0.999991
293		16		83	0.999991
294		8	75	16	0.99999
299	83			16	0.999991
300		16		83	0.999991
406	90			10	0.90298
411	90			10	0.90298
412	90			10	0.90298
416		10		90	0.90298
419	90		10		0.90298
420	90			10	0.90298
421	90	10			0.90298
423		10	90		0.90298
425	90	10			0.90298
426	10		90		0.90298
444	83		16		0.999991
448			16	83	0.999991
450	83		16		0.999991
452		16	83		0.999991
454	83			16	0.999991
455			83	16	0.999991
456	83		16		0.999991
458	83	16			0.999991
459	83			16	0.999991
460			16	83	0.999991
463	16			83	0.999991
539	60	40			1.0
541		57		42	1.0
546	42			57	1.0
547		42		57	1.0
548	57	42			1.0
549	57			42	1.0
552	55		44		1.0
553	55	44			1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain