SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene12780

Length: 1073 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene12780

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2568	8/8

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	69%
Blast2go	protein	-	-	77%

Source	ECs	Term	Type	e value	Identity
Blast2go	Aldehyde dehydrogenase (NAD(P)(+)).	EC:1.2.1.5	-	0.0	77%

Source	KEGGs	Term	Type	Identity
Blast2go	Glycolysis / Gluconeogenesis	00010		77%
Blast2go	Histidine metabolism	00340		77%
Blast2go	Tyrosine metabolism	00350		77%
Blast2go	Phenylalanine metabolism	00360		77%
Blast2go	beta-Alanine metabolism	00410		77%
Blast2go	Metabolism of xenobiotics by cytochrome P450	00980		77%
Blast2go	Drug metabolism - cytochrome P450	00982		77%
Blast2go	Metabolic pathways	01100		77%
Blast2go	Aldehyde dehydrogenase (NAD(+)).	EC:1.2.1.3	-	77%

Source	KEGGs	Term	Identity
Blast2go	Glycolysis / Gluconeogenesis	00010	77%
Blast2go	Pentose and glucuronate interconversions	00040	77%
Blast2go	Ascorbate and aldarate metabolism	00053	77%
Blast2go	Fatty acid metabolism	00071	77%
Blast2go	Valine, leucine and isoleucine degradation	00280	77%
Blast2go	Lysine degradation	00310	77%
Blast2go	Arginine and proline metabolism	00330	77%
Blast2go	Histidine metabolism	00340	77%
Blast2go	Tryptophan metabolism	00380	77%
Blast2go	beta-Alanine metabolism	00410	77%
Blast2go	Glycerolipid metabolism	00561	77%
Blast2go	Pyruvate metabolism	00620	77%
Blast2go	Chloroalkane and chloroalkene degradation	00625	77%
Blast2go	Propanoate metabolism	00640	77%
Blast2go	Limonene and pinene degradation	00903	77%
Blast2go	Metabolic pathways	01100	77%
Blast2go	Biosynthesis of secondary metabolites	01110	77%

Source	GOs	Term	Type	Identity
Blast2go	cell-matrix adhesion	GO:0007160	Biological Process	77%
Blast2go	cellular aldehyde metabolic process	GO:0006081	Biological Process	77%
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	77%
Blast2go	aldehyde dehydrogenase [NAD(P)+] activity	GO:0004030	Molecular Function	77%
Blast2go	aldehyde dehydrogenase (NAD) activity	GO:0004029	Molecular Function	77%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	77%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	77%
Blast2go	integrin complex	GO:0008305	Cellular Component	77%

Source	InterPros	Term	Type	Identity
Sma3	Aldehyde dehydrogenase NAD(P)-dependent	IPR012394	-	-
Sma3	FG-GAP	IPR013517	-	-
Sma3	Aldehyde dehydrogenase domain	IPR015590	-	-
Sma3	Aldehyde dehydrogenase, N-terminal	IPR016162	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: D7SP47

Fln msg: Distance to subject end: 406 aas, your sequence is shorter than subject: 293 - 696

Fln protein: MRKRDLGILILAALTIFFSLQHEGDFTFREAWLHLADDYPFKHEAERLPPPLIADLNGDGRSEILVATHDAKIQVLEPHVKGMNEGFTEARLISEVSLLPERVRISAGRRAVSMATGFVDRVHKQGEIRKQILVVVTAGWSIMCFDHNLKKLWEADVQEDFPHGALHREIAISISNYTLKHGDVGLVIVGGRMEIQPNLYLDPFEEAVVAEKNADRHRRSAEEKESSEDSSTKGGEQLRHFAYYAFAGRSGLQRWKHRSEDLPHHVADSSQLNPQHNYKLDAHALNGRHPGEV

Protein Length: 294

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTGTACATTCGACAAAGCTAGCGTATGCAATTTGCATTTTGGGGGTGGAAGGAAGTAGCATTTTGGGGGCTGCAACACTGAAGCTGGCATTCAGAGCCCTCTTTCATATGTAGAGATCACTTCGACGACTGCCGACAGAACAAGCAGTAGCATAACAAGGGGCAAGGG_-_ATGAGGAAGAGAGATCTGGGCATCCTTATTTTGGCGGCGTTGACCATATTTTTCTCTTTGCAGCATGAAGGAGATTTTACTTTCAGAGAAGCATGGCTTCACCTGGCTGATGATTATCCGTTCAAGCATGAAGCTGAGCGGCTTCCTCCTCCACTAATAGCAGATCTCAATGGTGATGGTCGGAGTGAAATTCTGGTTGCAACTCACGATGCAAAAATACAGGTATTGGAGCCTCACGTAAAGGGAATGAATGAAGGATTCACTGAAGCACGCCTAATTTCAGAGGTATCTTTGCTGCCAGAAAGAGTTCGTATTTCAGCAGGAAGACGGGCTGTATCAATGGCAACTGGTTTTGTTGATCGGGTGCATAAACAAGGAGAAATAAGAAAACAGATCCTGGTTGTAGTCACAGCAGGTTGGTCGATAATGTGCTTTGACCACAACCTCAAGAAACTATGGGAGGCTGATGTGCAGGAGGACTTTCCACATGGTGCTCTTCACAGAGAGATAGCAATTTCTATCAGTAACTATACATTGAAGCATGGAGATGTGGGGCTAGTAATTGTTGGGGGAAGGATGGAAATACAGCCAAATCTTTACCTGGATCCATTTGAAGAAGCAGTGGTTGCTGAAAAGAATGCAGACCGTCATCGAAGAAGCGCAGAGGAGAAAGAGTCTTCCGAGGATTCAAGCACTAAAGGTGGAGAGCAACTAAGGCACTTTGCTTATTATGCCTTCGCTGGGCGTTCTGGCTTACAGCGGTGGAAGCATAGGAGTGAGGATCTACCACACCATGTAGCTGATTCATCACAGTTGAATCCACAACACAACTACAAGCTTGATGCTCATGCATTGAATGGTCGACATCCTGGAGAGGTAG

Fln Alignment:

Contig12780___MRKRDLGILILAALTIFFSLQHEGDFTFREAWLHLADDYPFKHEAERLPPPLIADLNGDGRSEILVATHDAKIQVLEPHVKGMNEGFTEARLISEVSLLPERVRISAGRRAVSMATGFVDRVHKQGEIRKQILVVVTAGWSIMCFDHNLKKLWEADVQEDFPHGALHREIAISISNYTLKHGDVGLVIVGGRMEIQPNLYLDPFEEAVVAEKNADRHRRXXXXXXXXXXXXXXXXXQLRHFAYYAFAGRSGLQRWKHRSEDLPHHVADSSQLNPQHNYKLDAHALNGRHPGE
D7SP47________________MRKRDLAILMLSAFAIFFSLQHEGDFSFKEAWFHLSDEYPIKYEAERLPPPLVADLNGDGKKEVLVATHDAKIQVLEPHARRVDEGFSEARVLVEVSLLPDKIRISSGRRAVAMATGVVDRHYKQGQPQKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPHNAHHREIAISISNYTLKHGDAGLVIVGGRMEMLPHIYMDPFEVIGMTEKNAEQHRR---SANEKEASENAGTVDLRHFAFYAFAGRSGAVRWMRKNENIQTLSSDASQLIPQHNYKLDAHALNTRHPGE

SNPs (tot: 30)

Position	A %	C %	G %	T %	Probability
6			75	25	0.996473
8		25	75		0.996473
10		75	25		0.996473
11		75	25		0.996473
12	25			75	0.996473
13	25			75	0.996473
16		75		25	0.996473
20	25	75			0.996473
22		75		25	0.996473
24		75		25	0.996473
25	75	25			0.996473
38	80			20	0.995493
41	80			20	0.995493
42	80		20		0.995493
44		20	80		0.995493
47	80			20	0.995493
49		80	20		0.995493
50		20	80		0.995493
52	80		20		0.995493
59		20		80	0.995493
61		20	80		0.995493
62	20	80			0.995493
195		20	80		0.995493
203	88	11			0.923564
205	88	11			0.923564
207	88			11	0.923564
210		11		88	0.923564
213			88	11	0.923564
217	87		12		0.992554
222	12			87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain