SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene12413

Length: 974 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene12413

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18457	20/22

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Rab28 protein n=1 Tax=Zea mays RepID=Q41850_MAIZE	-	-	1.0e-08	34%
FL-Next	tr=Late embryogenesis abundant protein D-34, putative; Ricinus communis (Castor bean).	-	-	0.0	33%
Blast2go	late embryogenesis abundant protein d-34	-	-	3.63803e-09	50%

Source	GOs	Term	Type	e value	Identity
Blast2go	multicellular organismal development	GO:0007275	Biological Process	3.63803e-09	50%
Blast2go	nucleus	GO:0005634	Cellular Component	3.63803e-09	50%

Full-Lengther Next Prediction

SNPs (tot: 57)

Position	A %	C %	G %	T %	Probability
324	66		33		0.997452
325			66	33	0.997452
326	66	33			0.997452
327	66		33		0.997452
330	33			66	0.997452
334		66		33	0.997452
336	66		33		0.997452
338	66			33	0.997452
342			66	33	0.997452
346	66			33	0.997452
385		25	75		0.996473
387			75	25	0.996473
389	75		25		0.996473
390		75		25	0.996473
391	75		25		0.996473
393		25		75	0.996473
395	75			25	0.996473
396		75		25	0.996473
402	75		25		0.996473
406	25	75			0.996473
407	75	25			0.996473
409		25	75		0.996473
410	25		75		0.996473
413	50		50		1.0
454		50	50		1.0
482	80		20		0.995493
483			80	20	0.995493
486		80	20		0.995493
488	80	20			0.995493
491			80	20	0.995493
493		80	20		0.995493
496			80	20	0.995493
500	20		80		0.995493
501	80	20			0.995493
517		28		71	1.0
519		71		28	1.0
520	71	28			1.0
522		77		22	0.999999
525		22		77	0.999999
526		33		66	1.0
527	66		11	22	0.999999
528	66			33	1.0
530	11		88		0.923564
532	66	11		22	0.999999
533			88	11	0.923564
535		88	11		0.923564
536	22		11		0.999999
538			66	33	1.0
539		88	11		0.923564
541	88			11	0.923564
542		11	88		0.923564
546	88	11			0.923564
547	11	88			0.923564
593		22	77		0.999999
598		88		11	0.923564
602		12		87	0.992554
609		85		14	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain