SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene11953

Length: 878 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene11953

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17718	48/54

Source	Descriptions	Term	Type	Identity
AutoFact	DUF1681 domain containing protein	-	-	49%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	uncharacterized protein at1g03900-like	-	-	78%

Source	InterPros	Term	Type	e value	Identity
Sma3	Adaptin ear-binding coat-associated protein 1 NECAP-1	IPR012466	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 46)

Position	A %	C %	G %	T %	Probability
82		33		66	0.997452
84	66			33	0.997452
85		33	66		0.997452
86	66		33		0.997452
90		33	66		0.997452
92		66		33	0.997452
96		66	33		0.997452
105	66			33	0.997452
107	33			66	0.997452
156		25		75	0.996473
158	75			25	0.996473
159	75	25			0.996473
162	75		25		0.996473
164		25		75	0.996473
169			25	75	0.996473
172	75			25	0.996473
173	75		25		0.996473
174		75		25	0.996473
178		25		75	0.996473
181	25	75			0.996473
269	71	28			1.0
272			28	71	1.0
282	71	28			1.0
340		18	81		0.999994
343			18	81	0.999994
344	81			18	0.999994
345	81		18		0.999994
347		18	81		0.999994
349	81			18	0.999994
351		81	18		0.999994
352		18		81	0.999994
356		18	81		0.999994
358	81			18	0.999994
359		18	81		0.999994
446	10		90		0.90298
478	90		10		0.90298
482		90	10		0.90298
484	90	10			0.90298
485		12		87	0.992554
497		12	87		0.992554
498	12			87	0.992554
499		12		87	0.992554
683	66		33		1.0
776			50	50	1.0
833			50	50	1.0
858	75	25			0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain