SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene11861

Length: 941 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene11861

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14546	57/62

Source	Descriptions	Term	Type	Identity
AutoFact	Minor allergen Alt a, putative n=4 Tax=fabids RepID=B9T876_RICCO	-	-	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	protein	-	-	92%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	92%

Source	InterPros	Term	Type	e value	Identity
Sma3	Flavodoxin/nitric oxide synthase	IPR008254	-	0.0	-
Sma3	Flavoprotein WrbA	IPR010089	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
40		42		57	1.0
76	88	11			0.999937
81		11		88	0.999937
247	57	38	4		1.0
374			83	16	0.999991
391	90			10	0.90298
434	90			10	0.90298
435		10	90		0.90298
441			11	77	0.968132
442		11		88	0.923564
453			81	18	0.999994
456			10	90	0.90298
523		17		82	1.0
526	77			22	1.0
527		5	16	77	1.0
530	83		16		1.0
531		83		16	1.0
534	77	16			1.0
536		16		83	1.0
537	16		83		1.0
748		60		40	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain