SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene11424

Length: 1055 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene11424

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10687	25/25

Source	Descriptions	Term	Type	Identity
AutoFact	Josephin-like protein [Arabidopsis thaliana] sp\|O82391.1\|JOSL_ARATH RecName: Full=Josephin-like protein gb\|AAC35231.1\| hypothetical protein [Arabidopsis thaliana] gb\|AEC08284.1\| Josephin-like protein [Arabidopsis thaliana]	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	63%
Blast2go	josephin-like protein	-	-	76%

Source	InterPros	Term	Type	e value	Identity
Sma3	Machado-Joseph disease protein MJD	IPR006155	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 32)

Position	A %	C %	G %	T %	Probability
449		33		66	0.997452
451	66			33	0.997452
455			66	33	0.997452
458	66	33			0.997452
459		33		66	0.997452
461	66			33	0.997452
462			33	66	0.997452
464	66	33			0.997452
466	66		33		0.997452
472			66	33	0.997452
473		33		66	0.997452
474	33			66	0.997452
489		25		75	0.996473
491	75			25	0.996473
493	25		75		0.996473
494		25	75		0.996473
496	75			25	0.996473
497	75			25	0.996473
498	75		25		0.996473
500		25	75		0.996473
501	75			25	0.996473
502	75		25		0.996473
503	75			25	0.996473
504		25	75		0.996473
506		25	75		0.996473
508		25	75		0.996473
509	25			75	0.996473
529	50		50		1.0
943		90		10	0.90298
944	88			11	0.923564
945		11		88	0.923564
947	87	12			0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain