SustainPineDB

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Assembly info
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ECs
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene11197

Length: 485 nt

UniGene Fasta

>uagpf_v2_unigene11197
CGTCGTGACCTTGGCTGTCACTCACTCCATCCCGCCGTGGGCCGTCGGCCCGCCGCTCATTCTAGTCGGCGTGCTGATGATGAAGTCTGTGTTGGAAATCGACTTGGTGACCTTGGCTGTCATTCACCTTCGTGACTCTCATTGTCATGCCCACCACCTACTCGATCGCCTATGGTTTGATCGGCGGAATCGGGACCTTCATCGTTCTACATCTCTGGGATTGGGTCAAGGACGCCTTCGGAAGCGTCGCCGGTAAGCGGAGGATCCAGTCCCCCACAGCCGCAGCCGCAGCCACCGGCCCCACGCAGAGAGACATTGAGATGAACGGATCTAGCATCTGACTTCGGCGGGCGGGATCGAAGCCGTGACCTACAAAAAAAAACCACTCACAGGTTGTTATTCTATTGTTGTTTATTGTTAACAGGTAGCTTAGAAATCAGAGTAGGGCTTCGCAGCAGGCTGACTCCACCATGGCGTGTATATTA

Ace file of the UniGene uagpf_v2_unigene11197

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10658	3/4

Source	Descriptions	Term	Type	Identity
AutoFact	Adenine/guanine permease AZG1 n=2 Tax=Arabidopsis RepID=AZG1_ARATH	-	-	74%
FL-Next	sp=Adenine/guanine permease AZG1; Arabidopsis thaliana (Mouse-ear cress).	-	-	88%
Blast2go	adenine guanine permease azg1-like	-	-	83%

Source	GOs	Term	Type	Identity
Blast2go	guanine transport	GO:0015854	Biological Process	83%
Blast2go	adenine transport	GO:0015853	Biological Process	83%
Blast2go	purine base transmembrane transporter activity	GO:0005345	Molecular Function	83%
Blast2go	membrane	GO:0016020	Cellular Component	83%
Blast2go	plastid	GO:0009536	Cellular Component	83%

Source	InterPros	Term	Type	e value	Identity
Sma3	Xanthine/uracil/vitamin C permease	IPR006043	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: Q9SRK7

Fln msg: Separated hits, possible frame ERROR between 103 and 129, your sequence is shorter than subject: 114 - 579

Fln protein: VVTLAVTHSIPPWAVGPPLILVGVLMMKSVLEIxxxxxxxxxxFVTLIVMPTTYSIAYGLIGGIGTFIVLHLWDWVKDAFGSVAGKRRIQSPTAAAAATGPTQRDIEMNGSSI*

Protein Length: 115

Fln nts: CGTCGTGACCTTGGCTGTCACTCACTCCATCCCGCCGTGGGCCGTCGGCCCGCCGCTCATTCTAGTCGGCGTGCTGATGATGAAGTCTGTGTTGGAAATCGAxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTCGTGACTCTCATTGTCATGCCCACCACCTACTCGATCGCCTATGGTTTGATCGGCGGAATCGGGACCTTCATCGTTCTACATCTCTGGGATTGGGTCAAGGACGCCTTCGGAAGCGTCGCCGGTAAGCGGAGGATCCAGTCCCCCACAGCCGCAGCCGCAGCCACCGGCCCCACGCAGAGAGACATTGAGATGAACGGATCTAGCATCTGACTTCGGCGGGCGGGATCGAAGCCGTGACCTACAAAAAAAAACCACTCACAGGTTGTTATTCTATTGTTGTTTATTGTTAACAGGTAGCTTAGAAATCAGAGTAGGGCTTCGCAGCAGGCTGACTCCACCATGGCGTGTATATTA

Fln Alignment:

Contig11197___SIPPWAVGPPLILVGVLMMKSVLEIDxxxxxxxxxFVTLIVMPTTYSIAYGLIGGIGTFIVLHLWDW
Q9SRK7________________SIPAWAVGPPLILVGVMMMKSVTEIDxxxxxxxxxFVTMILMPLTYSVAYGLIGGIGSYVVLHLWDW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain