SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene10851

Length: 861 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene10851

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene783	10/11
SustainPine v2.0	sp_v2.0_unigene71710	1/11

Source	Descriptions	Term	Type	Identity
AutoFact	Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) n=3 Tax=rosids RepID=D7TNE7_VITVI	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	97%
Blast2go	probable receptor-like protein kinase at5g15080-like	-	-	82%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-tyrosine kinases.	EC:2.7.10.-	-	0.0	82%
Blast2go	Mitogen-activated protein kinase kinase kinase.	EC:2.7.11.25	-	0.0	82%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	82%
Blast2go	protein tyrosine kinase activity	GO:0004713	Molecular Function	82%
Blast2go	ATP binding	GO:0005524	Molecular Function	82%
Blast2go	MAP kinase kinase kinase activity	GO:0004709	Molecular Function	82%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LRT7

Fln msg: Distance to subject end: 230 aas, your sequence is shorter than subject: 255 - 484

Fln protein: MGLGPGVVQVEAWEQVGNSSRVGRRRKKDEAEARGCWHGLNFGLMSSCISSRSKVDNSISSPAIHSAETKSPNDSGKEPPAAQTVSSTSTSNTGSNPSTPKVGDDLKVASQLRKFTFNDLKYATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAYLHGGAER

Protein Length: 256

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGTTTTGAAGCGGGTCATTTTTTGAATTTGTGTGAGACCATGGATGTGAGAGCGCTTTATAAGGCCTGAGGG_-_ATGGGACTGGGGCCGGGTGTTGTACAGGTAGAGGCTTGGGAGCAGGTGGGCAATTCCAGTCGGGTTGGACGCCGGAGAAAGAAGGATGAAGCCGAGGCGCGGGGATGCTGGCATGGTCTGAACTTTGGGCTCATGAGCAGCTGCATCTCCTCCAGATCCAAAGTAGATAACTCCATAAGCAGCCCTGCTATCCATTCTGCTGAAACTAAATCTCCAAATGATAGTGGCAAAGAGCCGCCTGCTGCTCAGACAGTGTCTTCCACAAGTACTAGTAATACAGGAAGCAATCCATCCACTCCCAAAGTAGGAGATGATTTGAAAGTTGCATCCCAGTTGCGCAAATTCACTTTTAATGATTTGAAGTATGCAACCAGAAACTTCAGGCCAGAAAGTCTTCTTGGTGAAGGTGGCTTTGGTTGTGTTTTCAAAGGTTGGATAGAAGAGAATGGCACTGCTCCTGTCAAGCCTGGGACTGGTCTCACTGTAGCTGTAAAAACACTCAACCATGATGGGCTGCAAGGTCACAAGGAATGGCTGGCAGAAGTCAATTTTCTTGGGGACCTTATCCATCCTAATCTGGTTAAACTTATTGGGTATTGCATAGAAGATGATCAGAGGCTACTTGTGTATGAGTTTATGCCTCGAGGTAGCCTGGAGAATCATCTCTTCAGAAAAGGGTCCCTGCCCCTGCCATGGTCTATCAGGATGAAAATTGCATTGGGTGCAGCCAAAGGCCTGGCATATCTCCATGGAGGAGCTGAAAGA

Fln Alignment:

Contig10851___MGLGPGVVQVEAWEQVGNSSRVGRRRKKDEAEARGCWHGLNFGLMSSCISSRSKVDNSISSPAIHSAETKSPNDSGKEPPAAQTVXXXXXXXXXXXXXXXKVGDDLKVASQLRKFTFNDLKYATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAYLHGGAER
B8LRT7________________MGLGPGVVQVEAWEQVGNSSRVGGRRKKDEAEARGCWHGLNFGLMSSCISSRSKVDNSISSTAIHSAETKSPNDSSKEPPAAQTVSSTSTSNTGSNPSTPKVGDELKVASQLRKFTFNDLKYATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHGGAER

SNPs (tot: 23)

Position	A %	C %	G %	T %	Probability
424		20		80	0.995493
428	80		20		0.995493
430		80	20		0.995493
431	20	80			0.995493
433	80	20			0.995493
434			80	20	0.995493
436			20	80	0.995493
441		80		20	0.995493
442	80	20			0.995493
444	80	20			0.995493
446		20		80	0.995493
447	20	80			0.995493
561		16		83	0.994512
565	83		16		0.994512
566	83			16	0.994512
571			83	16	0.994512
573	16		16	66	0.988813
578		16	83		0.994512
579	16			83	0.994512
630	50		50		1.0
632	25		50		0.995533
755		66		33	0.997452
772		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain