SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene10738

Length: 864 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene10738

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene20012	12/12

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phospholipid/glycerol acyltransferase n=2 Tax=Helianthus annuus RepID=E6Y2H5_HELAN	-	-	2.00386e-43	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	glycerol-3-phosphate acyltransferase	-	-	0.0	81%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	81%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	0.0	81%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phospholipid/glycerol acyltransferase	IPR002123	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
376		33	66		1.0
403		66		33	0.997452
405			66	33	0.997452
408		33	66		0.997452
412		66	33		0.997452
413			33	66	0.997452
415	66			33	0.997452
455		25		75	0.996473
456			25	75	0.996473
459	75		25		0.996473
462		75	25		0.996473
464		25		75	0.996473
470	75		25		0.996473
471	75	25			0.996473
472		75		25	0.996473
473		75	25		0.996473
477			75	25	0.996473
508	87	12			0.992554
511		12		87	0.992554
512			12	87	0.992554
517	87	12			0.992554
518	87	12			0.992554
519	87			12	0.992554
522	87		12		0.992554
523	87	12			0.992554
527		12		87	0.992554
530	12	87			0.992554

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain