SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene10096

Length: 242 nt

UniGene Fasta

>uagpf_v2_unigene10096
CGTCGTGACCTTGGCTGTCACTCAGGTTATGCCCGGAGTAAGATGACTGATGCAGAATTACGCAAGATGATCAGTGGTAAACTGACTTGCAGGATTGATAAGAGGGCAAATTGTGAAGACAAAATGGATCAGTTTTTACAGCGCTGCTTTTACCATTCAGGTCAATACAACTCGGAGGACAACTTCAAAGAGCTAGACAAAAAATTGAAGGAACATGAGGCAGGGAGAGTGGCGAATCGGTT

Ace file of the UniGene uagpf_v2_unigene10096

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2079	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	Glucose-6-phosphate 1-dehydrogenase n=3 Tax=Andropogoneae RepID=C5YD77_SORBI	-	-	80%
FL-Next	sp=Glucose-6-phosphate 1-dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	47%
Blast2go	glucose-6-phosphate 1- chloroplastic-like	-	-	86%

Source	ECs	Term	Type	e value	Identity
Blast2go	Glucose-6-phosphate dehydrogenase.	EC:1.1.1.49	-	0.0	86%

Source	KEGGs	Term	Identity
Blast2go	Pentose phosphate pathway	00030	86%
Blast2go	Glutathione metabolism	00480	86%
Blast2go	Biosynthesis of alkaloids derived from histidine and purine	01065	86%
Blast2go	Biosynthesis of plant hormones	01070	86%
Blast2go	Metabolic pathways	01100	86%
Blast2go	Biosynthesis of secondary metabolites	01110	86%

Source	GOs	Term	Type	Identity
Blast2go	glucose metabolic process	GO:0006006	Biological Process	86%
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	86%
Blast2go	NADP binding	GO:0050661	Molecular Function	86%
Blast2go	glucose-6-phosphate dehydrogenase activity	GO:0004345	Molecular Function	86%
Blast2go	plastid	GO:0009536	Cellular Component	86%
Blast2go	mitochondrion	GO:0005739	Cellular Component	86%

Source	InterPros	Term	Type	e value	Identity
Sma3	Glucose-6-phosphate dehydrogenase	IPR001282	-	0.0	-
Sma3	NAD(P)-binding domain	IPR016040	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LPE6

Fln msg: Distance to subject end: 157 aas, your sequence is shorter than subject: 80 - 434

Fln protein: RRDLGCHSGYARSKMTDAELRKMISGKLTCRIDKRANCEDKMDQFLQRCFYHSGQYNSEDNFKELDKKLKEHEAGRVANR

Protein Length: 81

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGTTATGCCCGGAGTAAGATGACTGATGCAGAATTACGCAAGATGATCAGTGGTAAACTGACTTGCAGGATTGATAAGAGGGCAAATTGTGAAGACAAAATGGATCAGTTTTTACAGCGCTGCTTTTACCATTCAGGTCAATACAACTCGGAGGACAACTTCAAAGAGCTAGACAAAAAATTGAAGGAACATGAGGCAGGGAGAGTGGCGAATCGGTT

Fln Alignment:

Contig10096___GYARSKMTDAELRKMISGKLTCRIDKRANCEDKMDQFLQRCFYHSGQYNSEDNFKELDKKLKEHEAGRVANR
B8LPE6________________GYSRSDLTDEDLRSIIARNITCRIDHQENCGEKMDAFLRRTFYLFGGYDNCDGMTRLDLQMRQLEADGTANR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain