SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene9669

Length: 677 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene9669

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene13186	2/7
SustainPine v2.0	sp_v2.0_unigene19360	4/7
SustainPine v2.0	sp_v2.0_unigene59486	1/7

Source	Descriptions	Term	Type	Identity
AutoFact	Deoxyhypusine synthase n=4 Tax=Brassicaceae RepID=DHYS_ARATH	-	-	68%
FL-Next	sp=Deoxyhypusine synthase; Arabidopsis thaliana (Mouse-ear cress).	-	-	66%
Blast2go	deoxyhypusine synthase	-	-	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	embryo sac development	GO:0009553	Biological Process	0.0	80%

Source	InterPros	Term	Type	e value	Identity
Sma3	Cytosolic fatty-acid binding	IPR000463	-	0.0	-
Sma3	Deoxyhypusine synthase	IPR002773	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
25	66		33		0.997452
26	66			33	0.997452
31	66			33	0.997452
35		33		66	0.997452
36	66			33	0.997452
37	66		33		0.997452
41	66	33			0.997452
384	33	66			0.997452
401	75	25			0.996473
406	75			25	0.996473
411	25		75		0.996473
413	75		25		0.996473
415	75		25		0.996473
416		25		75	0.996473
428			75	25	0.996473
429	25		75		0.996473
439	25		75		0.996473
457	25		50	25	0.995533
459		66		33	0.997452
477		33		66	0.997452
478	33		66		0.997452
486			33	66	0.997452
490	66			33	0.997452
495		66		33	0.997452
508	33		66		0.997452
510		66		33	0.997452
512	33			66	0.997452
525			66	33	0.997452
531	33		66		0.997452
537	33	66			0.997452
561		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain