SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene8951

Length: 247 nt

UniGene Fasta

>uagpf_v2_unigene8951
CGTCGTGACCTTGGCTGTCACTCAGGTGGATTTGGTTACAGAGACTGACAAGGCATGCGAGGAGATTATTTTTCAACATCTAAAACAAATATACCCTGATCATCAGTTCATAGGAGAAGAAACTTCTGCAGTCTATGGAACTGCTGATTTGACGGATGCACCAACATGGATAATTGATCCACTCGATGGAACAACAAATTTTGTTCACAGGTTTCCTTTTGTTTGTGTGTCAATTGGACTTACCATT

Ace file of the UniGene uagpf_v2_unigene8951

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene11169	4/4

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Myo inositol monophosphatase, putative n=1 Tax=Ricinus communis RepID=B9T037_RICCO	-	-	3.0e-33	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	inositol monophosphatase	-	-	7.26151e-40	89%

Source	ECs	Term	Type	e value	Identity
Blast2go	3'(2'),5'-bisphosphate nucleotidase.	EC:3.1.3.7	-	7.26151e-40	89%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Sulfur metabolism	00920		7.26151e-40	89%
Blast2go	Metabolic pathways	01100		7.26151e-40	89%
Blast2go	Inositol-phosphate phosphatase.	EC:3.1.3.25	-	7.26151e-40	89%

Source	KEGGs	Term	e value	Identity
Blast2go	Inositol phosphate metabolism	00562	7.26151e-40	89%
Blast2go	Metabolic pathways	01100	7.26151e-40	89%
Blast2go	Biosynthesis of secondary metabolites	01110	7.26151e-40	89%
Blast2go	Phosphatidylinositol signaling system	04070	7.26151e-40	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	sulfur compound metabolic process	GO:0006790	Biological Process	7.26151e-40	89%
Blast2go	response to cold	GO:0009409	Biological Process	7.26151e-40	89%
Blast2go	L-ascorbic acid biosynthetic process	GO:0019853	Biological Process	7.26151e-40	89%
Blast2go	inositol biosynthetic process	GO:0006021	Biological Process	7.26151e-40	89%
Blast2go	L-galactose-1-phosphate phosphatase activity	GO:0010347	Molecular Function	7.26151e-40	89%
Blast2go	3'(2'),5'-bisphosphate nucleotidase activity	GO:0008441	Molecular Function	7.26151e-40	89%
Blast2go	inositol monophosphate 1-phosphatase activity	GO:0008934	Molecular Function	7.26151e-40	89%
Blast2go	plasma membrane	GO:0005886	Cellular Component	7.26151e-40	89%
Blast2go	response to karrikin	GO:0080167	Biological Process	7.26151e-40	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	Inositol monophosphatase	IPR000760	-	0.0	-
Sma3	Mo25-like	IPR013878	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NP29

Fln msg: Distance to subject end: 157 aas, your sequence is shorter than subject: 82 - 271

Fln protein: VVTLAVTQVDLVTETDKACEEIIFQHLKQIYPDHQFIGEETSAVYGTADLTDAPTWIIDPLDGTTNFVHRFPFVCVSIGLTI

Protein Length: 83

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGTGGATTTGGTTACAGAGACTGACAAGGCATGCGAGGAGATTATTTTTCAACATCTAAAACAAATATACCCTGATCATCAGTTCATAGGAGAAGAAACTTCTGCAGTCTATGGAACTGCTGATTTGACGGATGCACCAACATGGATAATTGATCCACTCGATGGAACAACAAATTTTGTTCACAGGTTTCCTTTTGTTTGTGTGTCAATTGGACTTACCATT

Fln Alignment:

Contig8951___QVDLVTETDKACEEIIFQHLKQIYPDHQFIGEETSAVYGTADLTDAPTWIIDPLDGTTNFVHRFPFVCVSIGLTI
A9NP29_______________KVDLVTETDKACEELAFQFLKQKYPEHKFIGEETSAVHGTDDLTDAPTWIIDPVDGTTNFVHRFPFVCISIGLTI

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
77		80		20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain