SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene8278

Length: 904 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene8278

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16794	19/20

Source	Descriptions	Term	Type	Identity
AutoFact	aldo/keto reductase family protein [Arabidopsis thaliana] dbj\|BAB11492.1\| aldose reductase-like protein [Arabidopsis thaliana] gb\|AAY78879.1\| aldo/keto reductase family protein [Arabidopsis thaliana] gb\|AED97606.1\| aldo/keto reductase family protein [Arab	-	-	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	82%
Blast2go	aldo keto reductase family protein	-	-	73%

Source	InterPros	Term	Type	e value	Identity
Sma3	Aldo/keto reductase	IPR001395	-	0.0	-
Sma3	Aldo/keto reductase, conserved site	IPR018170	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NPH6

Fln msg: warning!, putative chimeric sequence! or repetitive structureDistance to subject end: 56 aas, your sequence is shorter than subject: 261 - 317

Fln protein: MGSVGRVLELNTGTKIPLVGLGTAAMNQNPEDIKTAVATAIEVGYRHFDTASLYRSECPLGDALKDAFLKGLVAREEVFVTTKLWCGDLDDPVSALRTSLKNLQLDYVDLYLIHWPVRLRKEASFPIPKEEDFLPLDLESVWQGMEQCVHLGLTKAIGVSNFSSKKIGDLLSHAKIPPAVNQVEMHPLWQQQKLRDYCSKVNIHVSAWSPLGGPPKAQGSNGVIDSPVIKEIAEKYRKNYCSGYIEVGFGTGSKCVAKKLQ

Protein Length: 262

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGAAGAATCCAAGCCATTTTGCTTGTTGGATGCTCTGATCGTCACTGGTCACTGCTTCAAAATTTTCCAAGAAAACCTTTTGCCAGAGTCTGCTAAA_-_ATGGGGAGTGTAGGCAGAGTTCTAGAGCTCAACACAGGCACCAAAATACCATTGGTCGGTCTTGGAACAGCTGCCATGAATCAAAACCCCGAGGACATTAAGACAGCAGTGGCTACGGCAATAGAGGTGGGTTACAGGCACTTTGACACAGCTAGCCTATACAGGTCAGAATGTCCCTTGGGAGATGCTCTAAAGGATGCCTTTTTGAAGGGCTTAGTGGCACGGGAGGAGGTTTTTGTGACCACAAAACTGTGGTGTGGAGATTTAGATGATCCTGTATCTGCATTGAGGACGAGCTTAAAGAATTTGCAGCTGGATTATGTGGATTTGTACCTTATCCACTGGCCCGTAAGGTTGAGAAAGGAAGCCTCCTTTCCAATCCCCAAGGAGGAAGACTTTTTGCCCTTAGATCTTGAGTCTGTATGGCAAGGAATGGAACAATGTGTTCATCTGGGGCTCACAAAAGCCATTGGCGTGAGCAACTTCTCTTCTAAGAAGATTGGGGATCTGTTGAGCCATGCCAAGATTCCACCTGCTGTCAATCAGGTGGAGATGCATCCACTATGGCAACAACAAAAGTTGAGAGATTATTGCAGCAAGGTGAACATTCACGTGAGTGCATGGTCTCCTCTTGGAGGTCCCCCTAAAGCACAGGGTTCAAATGGTGTTATTGATAGCCCTGTTATTAAAGAGATCGCTGAAAAATATAGGAAAAACTACTGCTCAGGTTATATTGAGGTGGGGTTTGGAACAGGGAGTAAGTGTGTTGCCAAAAAGCTACAA

Fln Alignment:

Contig8278___MGSVGRVLELNTGTKIPLVGLGTAAMNQNPEDIKTAVATAIEVGYRHFDTASLYRSECPLGDALKDAFLKGLVAREEVFVTTKLWCGDLDDPVSALRTSLKNLQLDYVDLYLIHWPVRLRKEASFPIPKEEDFLPLDLESVWQGMEQCVHLGLTKAIGVSNFSSKKIGDLLSHAKIPPAVNQVEMHPLWQQQKLRDYCSKVNIHVSAWSPLGGPPKAQGSNGVIDSPVIKEIAEKYRKNYCSGYIEVGFGTGSKCVAK
A9NPH6_______________MGSAGKVVELNAGTKIPLVGLGTAAINQNPEEIKTAVATALEVGYRHFDTASLYRSECALGDALKEACLKGLVAREEFFVTTKLWSEDLDDPVSALRTSLKNLKLEYVDLYLIHWPLRLRKGSSFPIPKEEDFLPLDLESAWKGMEQCVHLGLTKAIGVSNFSCKKIGDLLSHAKISPAVNQVEMHPLWQQKKLRDYCSKVNIHVSAWSPLGGAPNAQGSNGVMDNPVIKEIAEKHGKTTAQVILRWGLEQGISVLPK

SNPs (tot: 33)

Position	A %	C %	G %	T %	Probability
100	25	75			0.996473
247		16	83		0.994512
250		16	83		0.994512
252	16		83		0.994512
313		66	33		0.997452
315	66			33	0.997452
316	66			33	0.997452
317	66	33			0.997452
319		33	66		0.997452
369	33			33	0.997753
405		80	20		0.995493
407			80	20	0.995493
408		80	20		0.995493
411		20		80	0.995493
412	20		80		0.995493
418		20	80		0.995493
419	80			20	0.995493
423			20	80	0.995493
424	80	20			0.995493
426	80		20		0.995493
516		25	75		0.996473
518	75			25	0.996473
519	75	25			0.996473
529			25	75	0.996473
530		25		75	0.996473
579			83	16	0.994512
658	87	12			0.992554
660	87			12	0.992554
661		12		87	0.992554
662			12	87	0.992554
663		87		12	0.992554
664		87	12		0.992554
676	87	12			0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain