SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene8069

Length: 1613 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene8069

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15158	20/21

Source	Descriptions	Term	Type	Identity
AutoFact	Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula]	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	42%
Blast2go	glucan endo- -beta-glucosidase	-	-	84%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase, cysteine peptidase active site	IPR000169	-	-
Sma3	Glycoside hydrolase, family 17	IPR000490	-	-
Sma3	Ubiquitin-conjugating enzyme, E2	IPR000608	-	-
Sma3	Peptidase aspartic, active site	IPR001969	-	-
Sma3	Histone H2A	IPR002119	-	-
Sma3	Peptidase C54	IPR005078	-	-
Sma3	Cytokine-induced anti-apoptosis inhibitor 1	IPR007785	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	X8	IPR012946	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	Ubiquitin-conjugating enzyme/RWD-like	IPR016135	-	-
Sma3	Ribosomal protein S2, conserved site	IPR018130	-	-

Full-Lengther Next Prediction

SNPs (tot: 82)

Position	A %	C %	G %	T %	Probability
95	40	60			1.0
96			60	40	1.0
98	40	60			1.0
99			60	40	1.0
103	40	60			1.0
104		60	40		1.0
106		40		60	1.0
107		40	60		1.0
108	40		60		1.0
109		60	40		1.0
113	40	60			1.0
117		40		20	1.0
118	20	80			0.995493
122			20	80	0.995493
156			16	83	0.994512
158		16		83	0.994512
164	16			83	0.994512
169		83		16	0.994512
170			16	83	0.994512
184	16			83	0.994512
369		16		83	0.994512
372	83	16			0.994512
375	75		25		0.996473
378	75	25			0.996473
379			75	25	0.996473
382		75	25		0.996473
384		75		25	0.996473
385	75		25		0.996473
386	75			25	0.996473
390	75			25	0.996473
392	25	75			0.996473
462			16	83	0.994512
465		83	16		0.994512
466	85			14	0.993533
472		85		14	0.993533
473	85			14	0.993533
474	85		14		0.993533
475		85	14		0.993533
476	85	14			0.993533
478		85	14		0.993533
479	85			14	0.993533
482		14	85		0.993533
483			85	14	0.993533
484	85	14			0.993533
511			22	77	0.999999
512	77			22	0.999999
517			22	77	0.999999
518	22	77			0.999999
521	77			22	0.999999
522	77			22	0.999999
523		77	22		0.999999
526		77		22	0.999999
531	55	44			1.0
549			88	11	0.923564
585	90	10			0.90298
586	90		10		0.90298
589			10	90	0.90298
590			90	10	0.90298
594			90	10	0.90298
599			90	10	0.90298
604	90			10	0.90298
605		10	90		0.90298
606	10		90		0.90298
663			11	88	0.923564
666			11	88	0.923564
668		88	11		0.923564
670	88	11			0.923564
671		11		88	0.923564
672			88	11	0.923564
673			88	11	0.923564
679			11	88	0.923564
681	88	11			0.923564
683		11	88		0.923564
779	88	11			0.923564
782	88	11			0.923564
786	11		88		0.923564
787		11	88		0.923564
788	88	11			0.923564
793	88			11	0.923564
794		88	11		0.923564
798			88	11	0.923564
800	14	85			0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain