SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene8003

Length: 1760 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene8003

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene8188	45/47

Source	Descriptions	Term	Type	Identity
AutoFact	Calmodulin-binding heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9RIW9_RICCO	-	-	64%
FL-Next	tr=Calmodulin-binding heat-shock protein, putative; Ricinus communis (Castor bean).	-	-	66%
Blast2go	calmodulin-binding heat-shock	-	-	78%

Source	ECs	Term	Type	e value	Identity
Blast2go	Triacylglycerol lipase.	EC:3.1.1.3	-	0.0	78%

Source	KEGGs	Term	Type	Identity
Blast2go	Glycerolipid metabolism	00561		78%
Blast2go	Metabolic pathways	01100		78%
Blast2go	Carboxylesterase.	EC:3.1.1.1	-	78%

Source	KEGGs	Term	Identity
Blast2go	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	78%
Blast2go	Drug metabolism - other enzymes	00983	78%
Blast2go	Metabolic pathways	01100	78%
Blast2go	Biosynthesis of secondary metabolites	01110	78%

Source	GOs	Term	Type	Identity
Blast2go	response to stress	GO:0006950	Biological Process	78%
Blast2go	lipid catabolic process	GO:0016042	Biological Process	78%
Blast2go	calmodulin binding	GO:0005516	Molecular Function	78%
Blast2go	triglyceride lipase activity	GO:0004806	Molecular Function	78%
Blast2go	carboxylesterase activity	GO:0004091	Molecular Function	78%

Source	InterPros	Term	Type	Identity
Sma3	Beta-lactamase-like	IPR001279	-	-
Sma3	Transaldolase	IPR001585	-	-
Sma3	Lipase, class 3	IPR002921	-	-
Sma3	Mono-/di-acylglycerol lipase, N-terminal	IPR005592	-	-
Sma3	RNA-metabolising metallo-beta-lactamase	IPR011108	-	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: B9RIW9

Fln msg:

Fln protein: MSTFGIPLLECIYCLGCSRWAWKRCIHSGAHDSEKWALANIEDFEPVRRILAVLAVYEDDLRNPKWAPTGGYRMNPDWLVKRVTYETTQGRAPPYLIYVDHEAHDIVLAIRGLNLAKESDYAVLLDNKLGQAMFDGGYVHNGLLKSATWLITAESDTLKDLIEKNPSYTLTFAGHSLGSGVAALLTLVVVNNRKSLGNIPRSQIRCYAIAPARCMSLNLAVKYADVINSVILQDDFLPRTATPLEDIFKSLFCLPCLLCVRCMKDTFMSDERKLKDPRRLYAPGRLYHIVDRKPCGCGRYPPEVKSAVPVEGRFEHIVLSLNTTSDHGIIWIEREAQKALNLMMEKNHSMEIPSEQRMERQETIAKERDKEHKNALERAHTLNIPHAFPPSSDTFDEDERSEQEALLNEPKNSLLDTEVGESSENKLTIEKKTDWEELINKLFMKNASGKVVLKKGLNTE*

Protein Length: 462

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTGTAATCTATTTGGGCTTTGACTGCAATTTTAATGTCAGCAAATCCATTTTCATTTTCATGTCTAATCGACATTTGGGTTCCAAGTTGACTTTCACCAATCCGCTGCAAAAATCATTCACAATCCCACCTATAGACATCTAAGCTATTTGAGATAGGCCTAATTTGAATTGGATGCACTACTTGACATCTGAGCTACTGGACATAAGCCCGATTTGAACTGGGTGCAGCAGCGAATTTCTGAATTTATTTTTTCTCGCATATGGGTTTTATGAAATTTGCTTTGGGGATATCGCATTCAAATGTCTACTGGTAAATAAGC_-_ATGTCTACCTTTGGAATACCTCTGTTAGAATGTATATATTGCTTGGGATGTTCTAGGTGGGCATGGAAACGTTGTATACACTCAGGAGCCCATGACAGTGAAAAATGGGCACTTGCCAATATTGAGGATTTTGAACCTGTGCGTCGGATCTTGGCTGTCCTTGCAGTTTATGAAGATGATTTGAGAAACCCTAAATGGGCACCTACAGGAGGCTATAGGATGAATCCTGATTGGTTAGTGAAGAGGGTCACTTATGAGACCACACAGGGCAGAGCTCCACCATATCTGATTTACGTTGATCATGAGGCTCATGATATAGTTTTGGCCATCAGAGGCCTAAATTTGGCTAAGGAAAGTGATTATGCTGTATTGCTGGACAATAAGCTGGGGCAAGCGATGTTTGATGGAGGCTATGTGCATAATGGGCTTCTCAAGTCGGCAACTTGGCTGATCACTGCTGAATCCGACACATTGAAGGATTTGATCGAGAAAAACCCTTCATATACCCTTACTTTTGCAGGGCACTCACTGGGGTCAGGAGTTGCTGCCCTGCTTACTTTGGTGGTGGTAAACAACAGGAAGAGCTTGGGTAATATACCCAGAAGTCAGATTCGGTGCTATGCAATCGCCCCTGCTCGGTGTATGTCACTTAACTTGGCAGTAAAATATGCAGACGTCATCAATTCTGTTATATTGCAGGATGATTTCTTGCCAAGGACTGCAACTCCCCTGGAAGATATTTTTAAGTCTCTTTTCTGCTTGCCTTGTTTATTGTGTGTTAGATGTATGAAAGACACGTTTATGTCAGATGAAAGGAAGCTCAAAGATCCACGAAGACTATATGCCCCAGGACGGTTATACCACATTGTGGACAGAAAGCCTTGTGGATGTGGAAGGTATCCACCGGAGGTGAAAAGTGCTGTTCCAGTTGAGGGGAGGTTTGAGCATATTGTCCTTTCACTGAATACTACATCTGACCATGGAATCATTTGGATTGAGAGAGAGGCGCAGAAAGCTTTGAATCTCATGATGGAGAAAAATCACTCTATGGAGATTCCTTCTGAACAAAGAATGGAAAGACAAGAGACGATTGCAAAAGAGCGTGATAAAGAGCACAAGAATGCTCTTGAAAGGGCTCACACCTTGAATATACCCCATGCATTCCCGCCATCTTCTGACACCTTTGACGAGGATGAACGCAGTGAGCAAGAAGCTCTTTTGAATGAACCCAAGAATTCATTACTGGATACAGAAGTTGGGGAATCTTCGGAAAATAAGCTGACAATTGAGAAAAAAACTGATTGGGAAGAGCTCATTAATAAACTTTTTATGAAAAATGCATCTGGTAAAGTTGTTTTGAAGAAAGGGTTGAACACTGAATAA___TGTTTGATGATTCTCTTTCCAATTAATTCTT

Fln Alignment:

Contig8003___GIPLLECIYCLGCSRWAWKRCIHSGAHDSEKWALANIEDFEPVRRILA-VLAVYEDDLRNPKWAPTGGYRMNPDWLVKRVTYETTQGRAPPYLIYVDHEAHDIVLAIRGLNLAKESDYAVLLDNKLGQAMFDGGYVHNGLLKSATWLITAESDTLKDLIEKNPSYTLTFAGHXXXXXXXXXXXXXXXNNRKSLGNIPRSQIRCYAIAPARCMSLNLAVKYADVINSVILQDDFLPRTATPLEDIFKSLFCLPCLLCVRCMKDTFMSDERKLKDPRRLYAPGRLYHIVDRKPCGCGRYPPEVKSAVPVEGRFEHIVLSLNTTSDHGIIWIEREAQKALNLMMEKNHSMEIPSEQRMERQETIAKERDKEHKNALERAHTLNIPHAFPPSS-DTFDEDERSEQEALLNEPKNSLLDTEVGESSENKLTIEKKTDWEELINKLFMKNASGKVVLKK
B9RIW9_______________GLPLVECVYCLACARWAWKRCLHSAGHDSETWGLATAEEFEPVPRLCRYILAVYEDDLRQPLWEPPGGYGIHPDWVILKKNYEDTLGRAPPYILYLDHDHADIVLAIRGLNLAKESDYAVLLDNKLGKRKIDGGYVHNGLLKAAGWVLDAESEILKELVRKYPKYTLTFAGHSLGSGVAAMLTLAVVLNRDKLGNIERKRVRCYAIAPARCMSLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSLFCLPCLLCLRCMRDTCIPEEQMLKDPRRLYAPGRLYHIVERKPFRMGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEREARRALDLMLEKDQIMEIPAKQRMERQETLVREHTEEYKAALQRAVTLAVPHAYSPSQYGTFDEQDEGLKG---DESQKSSGESSFGSSRKSK----SKENWDELIERLFEKDESGHMVLKK

SNPs (tot: 66)

Position	A %	C %	G %	T %	Probability
139	85			14	0.993533
495		50	50		1.0
496	50			50	1.0
497	50	50			1.0
502		50		50	1.0
509	50		50		1.0
510	50	50			1.0
513	50		50		1.0
516	50	50			1.0
517		50		50	1.0
519		50	50		1.0
520	50	50			1.0
584		11		88	0.923564
587	88	11			0.923564
588			11	88	0.923564
589		11		88	0.923564
592		22	77		0.999999
593		22		77	0.999999
595	77			22	0.999999
599	77	22			0.999999
600	77			22	0.999999
602	77			22	0.999999
603		22	77		0.999999
604	22		77		0.999999
605		22	77		0.999999
793	35	64			1.0
800		28		7	1.0
801	71			28	1.0
802	28	64			1.0
1087		90		10	0.90298
1088		90		10	0.90298
1089	11	88			0.923564
1090	11	88			0.923564
1093			88	11	0.923564
1154	75	12			0.975346
1155		87		12	0.992554
1291		40	60		1.0
1293		40	60		1.0
1294			60	40	1.0
1295		40	60		1.0
1296	40		60		1.0
1369		83		16	0.994512
1370	83	16			0.994512
1372	83			16	0.994512
1373	83		16		0.994512
1377		16		83	0.994512
1381	83		16		0.994512
1382	83	16			0.994512
1384		83	16		0.994512
1390	83	16			0.994512
1392		20	80		0.995493
1393	20		80		0.995493
1465		20	80		0.999996
1466	80		20		0.999996
1468	90		10		0.90298
1470	80	20			0.999996
1471			80	20	0.999996
1472	80			20	0.999996
1474		80	20		0.999996
1475	80	20			0.999996
1476		80		20	0.999996
1477	80		20		0.999996
1478	80			20	0.999996
1479		20	80		0.999996
1481	80	20			0.999996
1484	10	90			0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain