SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene7858

Length: 803 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene7858

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2449	5/12
SustainPine v2.0	sp_v2.0_unigene80513	5/12

Source	Descriptions	Term	Type	Identity
AutoFact	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Arabidopsis thaliana] gb\|AAG52070.1\|AC012679_8 putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)- pyrophosphoryl-undecapren	-	-	46%
FL-Next	tr=Glycosyl transferase family 28 protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).	-	-	50%
Blast2go	udp-n-acetylglucosamine--n-acetylmuramyl- pyrophosphoryl-undecaprenol n-acetylglucosamine transferase	-	-	65%

Source	GOs	Term	Type	Identity
Blast2go	cellular biosynthetic process	GO:0044249	Biological Process	65%
Blast2go	cellular cell wall organization or biogenesis	GO:0070882	Biological Process	65%
Blast2go	carbohydrate biosynthetic process	GO:0016051	Biological Process	65%
Blast2go	nitrogen compound metabolic process	GO:0006807	Biological Process	65%
Blast2go	acetylglucosaminyltransferase activity	GO:0008375	Molecular Function	65%
Blast2go	membrane	GO:0016020	Cellular Component	65%

Source	InterPros	Term	Type	Identity
Sma3	Enolpyruvate transferase domain	IPR001986	-	-
Sma3	Glycosyl transferase, family 28	IPR004276	-	-
Sma3	N-acetylglucosaminyltransferase, MurG	IPR006009	-	-
Sma3	Glycosyl transferase, family 28, C-terminal	IPR007235	-	-

Full-Lengther Next Prediction

SNPs (tot: 70)

Position	A %	C %	G %	T %	Probability
111		33	66		0.997452
112	66		33		0.997452
114		33	66		0.997452
116	66			33	0.997452
120		33	66		0.997452
122	66			33	0.997452
126	66		33		0.997452
127	66	33			0.997452
128	66			33	0.997452
130			66	33	0.997452
135		33		66	0.997452
136	33		66		0.997452
153		80	20		0.995493
155		20	60		0.99255
156	60		20	20	0.99255
157			20	80	0.995493
160	80			20	0.995493
161		20	80		0.995493
162		80		20	0.995493
163		20		80	0.995493
164	20			80	0.995493
169	60		20		0.99255
170	60	20		20	0.99255
171	80	20			0.995493
172	80			20	0.995493
173		20		80	0.995493
287	12	12	75		0.975346
288			87	12	0.992554
289	87		12		0.992554
290			87	12	0.992554
291	75	25			1.0
292	12		12	75	0.975346
300	12		87		0.992554
328		11		88	0.923564
330		88		11	0.923564
331	88	11			0.923564
333	88			11	0.923564
336	88	11			0.923564
337	88	11			0.923564
338			88	11	0.923564
339	85			14	0.993533
341			14	85	0.993533
342	85	14			0.993533
343	85			14	0.993533
344	85		14		0.993533
347	85	14			0.993533
349	85	14			0.993533
351		14	85		0.993533
352	14	85			0.993533
372		83	16		0.994512
373	83			16	0.994512
374	83	16			0.994512
375	83		16		0.994512
379	16			83	0.994512
384			16	83	0.994512
385			16	83	0.994512
386	83	16			0.994512
389	83		16		0.994512
390			83	16	0.994512
393	80	20			0.995493
394	80			20	0.995493
449			16	83	0.994512
450	83			16	0.994512
451	83		16		0.994512
455	83			16	0.994512
458		16		83	0.994512
463		16	83		0.994512
468	83	16			0.994512
668			75	25	0.996473
670	75		25		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain