SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene7782

Length: 615 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene7782

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1873	11/15
SustainPine v2.0	sp_v2.0_unigene77287	3/15

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SKC5_RICCO	-	-	1.0e-30	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%
Blast2go	atp binding	-	-	0.0	61%

Source	InterPros	Term	Type	Identity
Sma3	Phox/Bem1p	IPR000270	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Vacuolar protein sorting-associated protein	IPR009543	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-

Full-Lengther Next Prediction

SNPs (tot: 30)

Position	A %	C %	G %	T %	Probability
24	80		20		0.995493
25	80			20	0.995493
26		20		80	0.995493
27			20	80	0.995493
32		42		57	1.0
33			28	71	1.0
35	57	28	14		1.0
37	57			42	1.0
39	85			14	0.993533
41		42	57		1.0
42	14			85	0.993533
43		14		85	0.993533
44			28	71	1.0
45		14	85		0.993533
46	71	28			1.0
47	63	9	9	18	0.999997
48	7	15	76		0.999983
49	69	23		7	1.0
50	76	15		7	0.999983
53			76	7	0.999983
54		15	84		0.999986
55	15			76	0.999983
56	76		23		1.0
99			53	46	1.0
157	46		53		1.0
400	85	14			0.993533
458	80		20		0.995493
463		66		33	0.997452
464	66			33	0.997452
468	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain