SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene7399

Length: 909 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene7399

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene25796	13/14

Source	Descriptions	Term	Type	Identity
AutoFact	Heat shock protein-like n=3 Tax=Oryza sativa RepID=Q6K2F0_ORYSJ	-	-	55%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	86%
Blast2go	curved dna-binding protein	-	-	78%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3	Heat shock protein DnaJ	IPR003095	-	-
Sma3	Nodulin-like	IPR010658	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-
Sma3		IPR015609	-	-
Sma3	Heat shock protein DnaJ, conserved site	IPR018253	-	-

Full-Lengther Next Prediction

SNPs (tot: 59)

Position	A %	C %	G %	T %	Probability
95		25		75	0.996473
98	75	25			0.996473
100			75	25	0.996473
104		25	75		0.996473
111		75		25	0.996473
112		75	25		0.996473
119			75	25	0.996473
120		83		16	0.994512
121	16		33		1.0
122	83			16	0.994512
123	66	33			1.0
124		83	16		0.994512
126	16	66		16	0.988813
127		83	16		0.994512
128	66	16	16		0.988813
129		16		83	0.994512
132			83	16	0.994512
134	83			16	0.994512
135	66	16	16		0.988813
137		33		66	1.0
234			83	16	0.994512
274		87		12	0.992554
344	75	25			0.996473
345	75		25		0.996473
346		75		25	0.996473
347	75	25			0.996473
348	75		25		0.996473
351	25		75		0.996473
353	75	25			0.996473
354			75	25	0.996473
355	75			25	0.996473
356			25	75	0.996473
359		75		25	0.996473
364		25	75		0.996473
367	50		50		1.0
370	50		50		1.0
372			50	50	1.0
375		50		50	1.0
378		50	50		1.0
379		50	50		1.0
383		50		50	1.0
387	50	50			1.0
388			50	50	1.0
389		57	42		1.0
390	42		57		1.0
392		14		85	0.993533
395			14	85	0.993533
401	85			14	0.993533
409			85	14	0.993533
410	85	14			0.993533
528		87		12	0.992554
531	87			12	0.992554
533	12		87		0.992554
534	87	12			0.992554
535	87	12			0.992554
539		12		87	0.992554
544	87	12			0.992554
545			87	12	0.992554
547	12			87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain