SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene7339

Length: 1503 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene7339

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene7048	5/31
SustainPine v2.0	sp_v2.0_unigene8726	24/31
SustainPine v2.0	sp_v2.0_unigene78999	1/31

Source	Descriptions	Term	Type	Identity
AutoFact	ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	atp binding	-	-	82%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	0.0	82%

Source	KEGGs	Term	Identity
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	82%
Blast2go	Tetracycline biosynthesis	00253	82%
Blast2go	Histidine metabolism	00340	82%
Blast2go	Tyrosine metabolism	00350	82%
Blast2go	Phenylalanine metabolism	00360	82%
Blast2go	Tryptophan metabolism	00380	82%
Blast2go	Benzoxazinoid biosynthesis	00402	82%
Blast2go	Selenocompound metabolism	00450	82%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	82%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	82%
Blast2go	Methane metabolism	00680	82%
Blast2go	Porphyrin and chlorophyll metabolism	00860	82%
Blast2go	Carotenoid biosynthesis	00906	82%
Blast2go	Phenylpropanoid biosynthesis	00940	82%
Blast2go	Flavonoid biosynthesis	00941	82%
Blast2go	Anthocyanin biosynthesis	00942	82%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	82%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	82%
Blast2go	Insect hormone biosynthesis	00981	82%
Blast2go	Biosynthesis of type II polyketide products	01057	82%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	82%
Blast2go	Metabolic pathways	01100	82%
Blast2go	Biosynthesis of secondary metabolites	01110	82%

Source	GOs	Term	Type	Identity
Blast2go	phosphorylation	GO:0016310	Biological Process	82%
Blast2go	methylation	GO:0032259	Biological Process	82%
Blast2go	kinase activity	GO:0016301	Molecular Function	82%
Blast2go	methyltransferase activity	GO:0008168	Molecular Function	82%

Source	InterPros	Term	Type	e value	Identity
Sma3	Putative S-adenosyl-L-methionine-dependent methyltransferase	IPR004159	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LMQ4

Fln msg: Distance to subject end: 242 aas, your sequence is shorter than subject: 383 - 626

Fln protein: MGKEYSGSPKIHQLEFKKKRATWILGVVGLCTLFYVLGAWQNTLSPPSEVSRLSKANVVCNSLPPVVSSSSVSLDFEAHHAVGGNETSKESIMFEPCDMNYSEYTPCQDPVRSRKFDRTKLIYRERHCPDKKESLKCLIPAPPGYKNPFRWPKSRDYAWFANVPHRELTIEKAVQNWIQVEDDKFRFPGGGTMFTRGADAYIDDINKLIPLTDGSIRTAIDTGCGVASWGAYLLKRNILTMSFAPRDSHEAQVQFALERGIPAMIGIMSSERIPYPARAFDMAHCSRCLIPWKDYEGVYLIEVDRVLRPGGYWILSGPPINWKKHHKGWQRTPEDLKQEQDAIEDVAKRLCWKKVVEKGDLAIWQKPINHIECVKSRKTYKIP

Protein Length: 384

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTTTATATTTTCGCAGGCCTTCACTGGCGCACGTCCCGTCGTCGAGGTGATCTCAGTTTGGATCTGCTCGGCCGGTCAGGTCCAGCTCCAGGTACTGTGTCTCAAAGGGGAAACCAGCTAAGTAAAGCCCTCTGGGCATTCTACACTTGGGTTCTCTTCCGCTTTTTCTGATCTGCAACGTTTGCGGGCTCGAGCCCGAGAGAGAAGAATCCAGTGGAATCTCTGGCCTTCTGGAGCATAACAGAAAGTGATATTGTTAGCCGTGGATTTGAAGCATTTAAGGCGTGTCTTGCGGGTATCTAGATAAATATACACAGGAAGCAAGA_-_ATGGGGAAGGAGTACAGTGGCTCTCCCAAAATACACCAGTTGGAATTCAAGAAGAAACGCGCAACTTGGATCCTTGGAGTCGTTGGACTCTGCACTCTTTTCTATGTCTTGGGTGCATGGCAAAACACTTTGTCTCCGCCATCTGAAGTATCTAGACTGAGCAAGGCCAATGTTGTCTGTAATTCTTTGCCTCCGGTCGTTTCTTCTTCGTCTGTTTCCTTGGACTTTGAAGCCCATCATGCAGTAGGAGGAAATGAGACTTCAAAAGAAAGCATAATGTTTGAGCCCTGTGATATGAATTACAGTGAGTATACTCCCTGTCAGGATCCAGTGAGATCTCGCAAGTTCGATCGAACTAAATTGATATACAGAGAACGCCACTGCCCAGACAAGAAGGAGTCACTGAAATGCCTTATTCCTGCTCCTCCTGGCTACAAGAACCCCTTCCGTTGGCCCAAGAGCAGAGATTATGCTTGGTTTGCGAACGTTCCCCACAGGGAGCTGACAATAGAGAAGGCTGTGCAGAACTGGATCCAAGTTGAAGATGACAAGTTCCGGTTTCCAGGAGGGGGAACCATGTTCACTCGTGGTGCAGATGCTTACATTGATGATATCAATAAGTTGATTCCTCTGACAGATGGATCTATCAGAACTGCCATTGATACAGGGTGTGGAGTTGCTAGTTGGGGAGCTTATCTACTAAAGAGGAACATCTTAACCATGTCCTTTGCACCAAGGGATTCACATGAAGCACAGGTACAGTTTGCTCTGGAACGGGGCATTCCAGCAATGATAGGAATCATGTCGTCTGAAAGGATTCCCTATCCAGCAAGAGCTTTTGACATGGCTCATTGTTCTCGATGTCTTATTCCATGGAAAGATTATGAGGGTGTATACTTGATTGAAGTGGACAGGGTATTGAGGCCTGGTGGTTATTGGATATTATCTGGTCCCCCAATAAATTGGAAAAAACATCATAAAGGATGGCAAAGAACTCCCGAGGATTTGAAACAAGAGCAAGATGCTATTGAAGATGTTGCTAAACGCCTCTGTTGGAAGAAGGTTGTCGAAAAGGGTGATCTTGCTATATGGCAAAAGCCCATAAATCACATTGAGTGTGTGAAAAGCAGAAAAACGTATAAGATTCCTCA

Fln Alignment:

Contig7339___MGKEYSGSPKIHQLEFKKKRATWILGVVGLCTLFYVLGAWQNTLSPPSEVSRLSKAXXXXXXXXXXXXXXXXXXDFEAHHAVGGNETSKESIMFEPCDMNYSEYTPCQDPVRSRKFDRTKLIYRERHCPDKKESLKCLIPAPPGYKNPFRWPKSRDYAWFANVPHRELTIEKAVQNWIQVEDDKFRFPGGGTMFTRGADAYIDDINKLIPLTDGSIRTAIDTGCGVASWGAYLLKRNILTMSFAPRDSHEAQVQFALERGIPAMIGIMSSERIPYPARAFDMAHCSRCLIPWKDYEGVYLIEVDRVLRPGGYWILSGPPINWKKHHKGWQRTPEDLKQEQDAIEDVAKRLCWKKVVEKGDLAIWQKPINHIECVKSRKTYKIP
B8LMQ4_______________MGKDYSGSPKLHQSEFKKKRLTWILGVAGLCTLFYFLGAWQNTLPPPSEASRLRKANVSCSSLSPIVSSSSVSLDFEAHHAVGGNETSKDSINFESCDIKYSEYTPCQDPDRARKFDRTKLIYRERHCPDKKEALKCLIPAPPGYKNPFRWPKSRDYAWFANVPHRELTIEKAVQNWIQVEDDKFRFPGGGTMFTRGADAYIDDIDKLIPLTDGSIRTAIDTGCGVASWGAYLLKRNILTMSFAPRDTHEAQVQFALERGVPAMIGIMASQRIPYPARAFDMAHCSRCLIPWKDYDGVYLIEVDRVLRPGGYWILSGPPVNWKKYHRGWERTPEDLKQEQDAIEDVAKRLCWKKVVEKGDLAIWQKPMNHIDCVKSRNIYKVP

SNPs (tot: 96)

Position	A %	C %	G %	T %	Probability
32	66			33	0.997452
39			33	66	0.997452
141	80		20		0.995493
142		80		20	0.995493
144	87		12		0.992554
145			75	12	0.975346
150	87	12			0.992554
151		12	87		0.992554
154	87			12	0.992554
155	87		12		0.992554
158		87		12	0.992554
159		87	12		0.992554
162	12			87	0.992554
163		12	87		0.992554
164			87	12	0.992554
165		12	87		0.992554
166	12	87			0.992554
419	50		50		1.0
648			88	11	0.923564
649		11		88	0.923564
651	88	11			0.923564
688	88	11			0.923564
692	88			11	0.923564
695		11		88	0.923564
698		88		11	0.923564
700		88	11		0.923564
701	88	11			0.923564
702	88			11	0.923564
707	11		88		0.923564
708	88	11			0.923564
733	90			10	0.90298
736		90		10	0.90298
737		90	10		0.90298
741			90	10	0.90298
742		90	10		0.90298
743		90	10		0.90298
745	90			10	0.90298
750	90	10			0.90298
751			90	10	0.90298
752	88	11			0.923564
757			77	11	0.968132
758	11			88	0.923564
761		66		33	1.0
880	28		71		1.0
903	66		33		1.0
925	60			40	1.0
941	60	40			1.0
945	40		60		1.0
961		60		40	1.0
975	60		40		1.0
994	60		40		1.0
1009	60		40		1.0
1027		20	80		0.995493
1029	20		60	20	0.99255
1030		20		80	0.995493
1034	20		80		0.995493
1035	80	20			0.995493
1036		20	80		0.995493
1047	20			80	0.995493
1048		20	80		0.995493
1049			80	20	0.995493
1050		25	75		0.996473
1051	25		75		0.996473
1061	25		75		0.996473
1073		25		75	0.996473
1079	80	20			0.995493
1080	80		20		0.995493
1081		80		20	0.995493
1083	80		20		0.995493
1086	20			80	0.995493
1091			20	80	0.995493
1094	80			20	0.995493
1095		80	20		0.995493
1096		80		20	0.995493
1097	80	20			0.995493
1099		20	80		0.995493
1100			80	20	0.995493
1101		20	80		0.995493
1154		16	83		0.994512
1155	66		16	16	0.988813
1156			16	83	0.994512
1157	83	16			0.994512
1158		16	83		0.994512
1159		16	66	16	0.988813
1160	66		16	16	0.988813
1161	83			16	0.994512
1162		16	16	66	0.988813
1163		83	16		0.994512
1164	66	16		16	0.988813
1167			16	83	0.994512
1169	16			16	0.988813
1170		16	83		0.994512
1173	16			83	0.994512
1174		16	83		0.994512
1175	83			16	0.994512
1176	83	16			0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain