SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene7027

Length: 579 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene7027

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6760	3/18
SustainPine v2.0	sp_v2.0_unigene60432	13/18
SustainPine v2.0	sp_v2.0_unigene74660	1/18

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Abhydrolase_6 multi-domain protein	-	-	4.0e-15	15%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	polyneuridine-aldehyde esterase	-	-	0.0	60%

Source	ECs	Term	Type	e value	Identity
Blast2go	Carboxylesterase.	EC:3.1.1.1	-	0.0	60%

Source	KEGGs	Term	Identity
Blast2go	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	60%
Blast2go	Drug metabolism - other enzymes	00983	60%
Blast2go	Metabolic pathways	01100	60%
Blast2go	Biosynthesis of secondary metabolites	01110	60%

Source	GOs	Term	Type	Identity
Blast2go	systemic acquired resistance	GO:0009627	Biological Process	60%
Blast2go	salicylic acid metabolic process	GO:0009696	Biological Process	60%
Blast2go	methyl indole-3-acetate esterase activity	GO:0080030	Molecular Function	60%
Blast2go	methyl salicylate esterase activity	GO:0080031	Molecular Function	60%
Blast2go	methyl jasmonate esterase activity	GO:0080032	Molecular Function	60%

Source	InterPros	Term	Type	e value	Identity
Sma3	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 36)

Position	A %	C %	G %	T %	Probability
153	80	20			0.995493
154	80		20		0.995493
155		80		20	0.995493
157	80		20		0.995493
158			80	20	0.995493
160	20			80	0.995493
161		20		80	0.995493
162		20		80	0.995493
163	80			20	0.995493
166	80		20		0.995493
168	80			20	0.995493
171		20	80		0.995493
173	80	20			0.995493
255	71			28	1.0
257	71		28		1.0
259			28	71	1.0
266	71		28		1.0
267			28	71	1.0
270	71			28	1.0
271	71		28		1.0
272	71			28	1.0
275		28	71		1.0
278	14	85			0.993533
279	14	85			0.993533
285		30	69		1.0
287	69			30	1.0
288		30		69	1.0
289	69		30		1.0
291		69	30		1.0
294		28	71		1.0
295		71		28	1.0
300			73	26	1.0
302	66	6		26	1.0
303		26	73		1.0
306			73	26	1.0
308	26	73			1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain