SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene6792

Length: 716 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene uagpf_v2_unigene6792 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene21574	10/10

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Mitochondrial import inner membrane translocase subunit TIM14, putative n=1 Tax=Ricinus communis RepID=B9SUN9_RICCO	-	-	2.0e-37	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%
Blast2go	chaperone -domain containing protein	-	-	0.0	86%

Source	InterPros	Term	Type	e value	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 50)

Position	A %	C %	G %	T %	Probability
323	11	88			0.923564
324	44		55		1.0
327	11			88	0.923564
329		11	88		0.923564
331	11			88	0.923564
335		11		88	0.923564
336	11		88		0.923564
339			11	88	0.923564
342		88	11		0.923564
359		87		12	0.992554
360		87	12		0.992554
361	12			87	0.992554
363	12	87			0.992554
364			12	87	0.992554
365		12		87	0.992554
366		12		87	0.992554
368	12			87	0.992554
369		87	12		0.992554
370			12	87	0.992554
372	87	12			0.992554
373	12			87	0.992554
375	87		12		0.992554
378			12	87	0.992554
420		57		42	1.0
423			42	57	1.0
441		42		57	1.0
442		42	57		1.0
443	42	57			1.0
446		42	57		1.0
449	57			42	1.0
450			57	42	1.0
452		57	42		1.0
453	57			42	1.0
456	42		57		1.0
457	42			57	1.0
458		57		42	1.0
459	57			42	1.0
460		57		42	1.0
565			80	20	0.995493
567	25	75			0.996473
572	25	75			0.996473
575			25	75	0.996473
576		25		75	0.996473
577		25		75	0.996473
578	25			75	0.996473
579	25		75		0.996473
580			25	75	0.996473
581			25	75	0.996473
586		25	75		0.996473
589	75	25			0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain