SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene6762

Length: 694 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene6762

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10789	17/21
SustainPine v2.0	sp_v2.0_unigene28615	3/21

Source	Descriptions	Term	Type	Identity
AutoFact	flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct]	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	protein kinase	-	-	86%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:2.7.112.1	-	0.0	86%
Blast2go	Mitogen-activated protein kinase kinase kinase.	EC:2.7.11.25	-	0.0	86%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	86%
Blast2go	protein serine/threonine/tyrosine kinase activity	GO:0004712	Molecular Function	86%
Blast2go	ATP binding	GO:0005524	Molecular Function	86%
Blast2go	MAP kinase kinase kinase activity	GO:0004709	Molecular Function	86%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Serine/threonine-protein kinase, ATN1-like	IPR015784	-	-

Full-Lengther Next Prediction

SNPs (tot: 54)

Position	A %	C %	G %	T %	Probability
27	25	50			0.995533
29		50		50	1.0
38		50		50	1.0
39	50		50		1.0
40	50		50		1.0
47		50	50		1.0
52	66	33			1.0
53	66		33		1.0
55	66	33			1.0
61		33	66		1.0
62	66			33	1.0
63	66			33	1.0
64	66		33		1.0
65	66		33		1.0
72		33	66		1.0
74		16		83	0.994512
75	16	83			0.994512
130			25	75	1.0
133	75			25	1.0
134	75		25		1.0
136		25	75		1.0
137	75	25			1.0
138	75			25	1.0
140	75		25		1.0
143	75		25		1.0
145	25			75	1.0
148		25	75		1.0
149	25	75			1.0
198	88		11		0.923564
199	88			11	0.923564
200		11	88		0.923564
205	88	11			0.923564
206		11	88		0.923564
207	88			11	0.923564
210		88	11		0.923564
212	88			11	0.923564
213	88		11		0.923564
215		11	88		0.923564
216	11		88		0.923564
218	88	11			0.923564
231	90	10			0.90298
232	90		10		0.90298
235	78		21		1.0
236		7		21	1.0
239			71	28	1.0
241	21		78		1.0
242	71	28			1.0
243		21		78	1.0
244			7	21	1.0
246		78	21		1.0
247	7		21		1.0
250		7	21		1.0
255	7	14		78	0.999974
256	14		85		0.999981

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain