SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene6377

Length: 1389 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene6377

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16169	4/41
SustainPine v2.0	sp_v2.0_unigene23603	33/41
SustainPine v2.0	sp_v2.0_unigene63557	2/41

Source	Descriptions	Term	Type	Identity
AutoFact	Osmotic stress-activated protein kinase n=1 Tax=Nicotiana tabacum RepID=Q8RXH5_TOBAC	-	-	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	serine threonine protein kinase	-	-	91%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3		IPR015740	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-

Full-Lengther Next Prediction

SNPs (tot: 83)

Position	A %	C %	G %	T %	Probability
93		70		30	1.0
94			10	90	0.90298
95			80	20	0.999996
96	50	10	40		1.0
97		30	70		1.0
98	50			50	1.0
100	60			40	1.0
102	20		50	10	0.999999
103	70	20		10	0.999998
104			60	20	0.999999
106	20			20	0.999999
107		20	80		0.999996
109		10	90		0.90298
112		10	90		0.90298
114		10		90	0.90298
116		10		90	0.90298
117	10			90	0.90298
136		14	85		0.999981
137		85	14		0.999981
140	14	85			0.999981
141	85	14			0.999981
142		14	85		0.999981
143	85			14	0.999981
145		85	14		0.999981
148	85			14	0.999981
150		14	85		0.999981
367	77			11	0.968132
369	88		11		0.923564
372	88	11			0.923564
375		88	11		0.923564
378			11	88	0.923564
382	88	11			0.923564
383			88	11	0.923564
384		11	88		0.923564
531		33		66	0.997452
533		66		33	0.997452
535	66		33		0.997452
539		33		66	0.997452
540	66			33	0.997452
543	66		33		0.997452
544	66	33			0.997452
545	66			33	0.997452
546	66		33		0.997452
550		25		75	0.996473
551			75	25	0.996473
553	14	85			0.993533
554	71		28		1.0
558		71		28	1.0
561		28		71	1.0
566	71		28		1.0
571			85	14	0.993533
572	71	14		14	0.984337
573	85	14			0.993533
574	85	14			0.993533
575	71	14		14	0.984337
576		14		85	0.993533
577	85	14			0.993533
578	14	85			0.993533
602	14	85			0.993533
603		71		28	1.0
613	87	12			0.992554
614			12	87	0.992554
616		12		87	0.992554
622		12		87	0.992554
624		87		12	0.992554
627	87	12			0.992554
629	87			12	0.992554
1152		25	75		0.996473
1154	75			25	0.996473
1155	75	25			0.996473
1157			75	25	0.996473
1161		25	75		0.996473
1162		25	75		0.996473
1163	75			25	0.996473
1164	75			25	0.996473
1170		75		25	0.996473
1174	75	25			0.996473
1175			75	25	0.996473
1176		25	75		0.996473
1314	75			25	0.996473
1315			75	25	0.996473
1316	75	25			0.996473
1318	75	25			0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain