SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene6099

Length: 512 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene uagpf_v2_unigene6099 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6180	12/12

Source	Descriptions	Term	Type	e value	Identity
AutoFact	inositol 5-phosphatase 1 [Dictyostelium discoideum]	-	-	5.0e-12	28%
FL-Next	tr=Predicted protein; Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga).	-	-	0.0	33%
Blast2go	protein	-	-	1.52555e-39	52%

Source	GOs	Term	Type	e value	Identity
Blast2go	cellular metabolic process	GO:0044237	Biological Process	1.52555e-39	52%
Blast2go	response to stimulus	GO:0050896	Biological Process	1.52555e-39	52%
Blast2go	primary metabolic process	GO:0044238	Biological Process	1.52555e-39	52%
Blast2go	negative regulation of cellular process	GO:0048523	Biological Process	1.52555e-39	52%
Blast2go	protein binding	GO:0005515	Molecular Function	1.52555e-39	52%
Blast2go	inositol or phosphatidylinositol phosphatase activity	GO:0004437	Molecular Function	1.52555e-39	52%
Blast2go	intracellular part	GO:0044424	Cellular Component	1.52555e-39	52%

Source	InterPros	Term	Type	Identity
Sma3	C2 calcium-dependent membrane targeting	IPR000008	-	-
Sma3	Inositol polyphosphate-related phosphatase	IPR000300	-	-
Sma3	Endonuclease/exonuclease/phosphatase	IPR005135	-	-

Full-Lengther Next Prediction

SNPs (tot: 42)

Position	A %	C %	G %	T %	Probability
211		36		63	1.0
227			81	18	0.999994
228		81	18		0.999994
229	20			80	0.999996
233	20			80	0.999996
235		80	20		0.999996
244		20	80		0.999996
247	80	20			0.999996
248			20	80	0.999996
251			20	80	0.999996
295		87		12	0.992554
296		87	12		0.992554
297	12			87	0.992554
298			12	87	0.992554
299		87		12	0.992554
300			12	87	0.992554
301	12	87			0.992554
307	10			90	0.90298
308	10	90			0.90298
309			10	90	0.90298
310			10	90	0.90298
312	90	10			0.90298
314	90	10			0.90298
316	10		90		0.90298
411	87		12		0.992554
415			12	87	0.992554
416	12			87	0.992554
417		12	87		0.992554
418	12		87		0.992554
419			12	87	0.992554
424			12	87	0.992554
425	12		87		0.992554
426	87			12	0.992554
428		12	87		0.992554
431		12		87	0.992554
432	87		12		0.992554
450		14	85		0.993533
452			85	14	0.993533
456		85		14	0.993533
459		85		14	0.993533
464	14		85		0.993533
466		71	14		0.984337

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain