SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene6087

Length: 966 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene6087

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene19340	23/26
SustainPine v2.0	sp_v2.0_unigene79387	1/26

Source	Descriptions	Term	Type	Identity
AutoFact	ribosomal protein S24/S35 [Arabidopsis thaliana] ref\|NP_850608.1\| ribosomal protein S24/S35 [Arabidopsis thaliana] gb\|AAG40012.1\|AF324661_1 AT3g18240 [Arabidopsis thaliana] gb\|AAG41489.1\|AF326907_1 unknown protein [Arabidopsis thaliana] gb\|AAK15567.1\|AF34	-	-	49%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	65%
Blast2go	ribosomal protein s24 s35	-	-	66%

Source	GOs	Term	Type	e value	Identity
Blast2go	cytosol	GO:0005829	Cellular Component	0.0	66%
Blast2go	nucleus	GO:0005634	Cellular Component	0.0	66%

Full-Lengther Next Prediction

SNPs (tot: 85)

Position	A %	C %	G %	T %	Probability
228		80	20		0.995493
230		20	80		0.995493
232		80	20		0.995493
233	20	20	60		0.99255
236	60			40	1.0
240		40		60	1.0
244	50	50			1.0
245		16	50	33	1.0
247	50			50	1.0
248		50	50		1.0
250		50		50	1.0
360		16	83		0.994512
361	83		16		0.994512
363		16	83		0.994512
364		83	16		0.994512
367	16		83		0.994512
369	83	16			0.994512
370	83			16	0.994512
371	83			16	0.994512
376	83			16	0.994512
380		16		83	0.994512
406	85		14		0.993533
407		85		14	0.993533
413		14	85		0.993533
414			85	14	0.993533
415	85			14	0.993533
417	85		14		0.993533
418	85	14			0.993533
424	85	14			0.993533
425	85			14	0.993533
426		14	85		0.993533
431		12		87	0.992554
432			12	87	0.992554
434		12	87		0.992554
435	87		12		0.992554
436			87	12	0.992554
440	87	12			0.992554
443	87		12		0.992554
444	87		12		0.992554
445		12		87	0.992554
458	87	12			0.992554
460	87			12	0.992554
461	87	12			0.992554
464	87			12	0.992554
467	87	12			0.992554
468	87			12	0.992554
469	87			12	0.992554
470	87		12		0.992554
473	87			12	0.992554
475	87			12	0.992554
481	85	14			0.993533
482	14			85	0.993533
517	85	14			0.993533
518	85		14		0.993533
520		14		85	0.993533
522	85			14	0.993533
523	85		14		0.993533
525		14	85		0.993533
527			85	14	0.993533
528	85			14	0.993533
529	85		14		0.993533
530			14	85	0.993533
532		87		12	0.992554
533	71		28		1.0
534	71			28	1.0
535	71	28			1.0
536	85		14		0.993533
537		17		82	1.0
541	5	78	5	10	0.999769
542	73		10	15	1.0
543	84	5		10	0.999846
544		10	89		0.999919
545	73	10	10	5	0.999718
546	73	10	5	10	0.999718
547	75	5		20	1.0
549	70	5	10	15	1.0
551	10			85	0.999793
552		10	85	5	0.999793
553	80		5	15	1.0
554		20	80		1.0
555	15	5	70	10	1.0
556		15	80	5	1.0
557	10	85	5		0.999793
869	80			20	0.995493
870	40			60	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain