SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene5684

Length: 664 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene uagpf_v2_unigene5684 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3457	10/10

Source	Descriptions	Term	Type	Identity
AutoFact	putative sulfolipid synthase [Oryza sativa Japonica Group] dbj\|BAE79759.1\| putative sulfolipid synthase [Oryza sativa Japonica Group] dbj\|BAG89787.1\| unnamed protein product [Oryza sativa Japonica Group]	-	-	72%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	77%
Blast2go	gdp-mannose-dependent alpha-mannosyltransferase-like	-	-	86%

Source	GOs	Term	Type	Identity
Blast2go	biosynthetic process	GO:0009058	Biological Process	86%
Blast2go	transferase activity	GO:0016740	Molecular Function	86%
Blast2go	plastid	GO:0009536	Cellular Component	86%

Source	InterPros	Term	Type	e value	Identity
Sma3	Glycosyl transferase, family 1	IPR001296	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	G %	T %	Probability
631	16		83	0.994512
632	20		20	0.99255
665	25	75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain