SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene5568

Length: 967 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene5568

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3085	21/22

Source	Descriptions	Term	Type	Identity
AutoFact	DUF803 domain containing protein	-	-	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	79%
Blast2go	magnesium transporter nipa2	-	-	69%

Source	GOs	Term	Type	e value	Identity
Blast2go	membrane	GO:0016020	Cellular Component	0.0	69%

Source	InterPros	Term	Type	Identity
Sma3	Protein of unknown function DUF679	IPR007770	-	-
Sma3	Magnesium transporter NIPA	IPR008521	-	-
Sma3	Homeobox, conserved site	IPR017970	-	-

Full-Lengther Next Prediction

SNPs (tot: 60)

Position	A %	C %	G %	T %	Probability
135		66		33	0.997452
136		33		66	0.997452
139		66	33		0.997452
141		33		66	0.997452
146	66		33		0.997452
151	66			33	0.997452
156			66	33	0.997452
188			28	71	1.0
190		28	71		1.0
192		71		28	1.0
193			28	71	1.0
199	71			28	1.0
200			28	71	1.0
202		28		71	1.0
203	71			28	1.0
204		71	28		1.0
205	71			28	1.0
258		57		42	1.0
281		11	88		0.923564
282			11	88	0.923564
285		88	11		0.923564
286	88			11	0.923564
290		11		88	0.923564
296	88			11	0.923564
297		11	88		0.923564
299		11	88		0.923564
300			88	11	0.923564
331	60		40		1.0
332		6	53	40	1.0
333		60	40		1.0
335		40	60		1.0
336		33	60	6	1.0
337	53			46	1.0
338			66	33	1.0
340	60		33		1.0
343		6	40		1.0
345		33	60		1.0
346	33	60			1.0
350	35			64	1.0
576		23		76	1.0
577			15	76	0.999983
578			70	30	1.0
579		30	70		1.0
580	10		90		0.90298
581			10	90	0.90298
582			30	70	1.0
583	20	70		10	0.999998
584	66	22		11	0.999999
585		33	66		1.0
586	77			22	0.999999
587	66		11	22	0.999999
588	77		22		0.999999
589	77		22		0.999999
590	11	22	66		0.999999
591	11			88	0.923564
594		22	66		0.999999
595	25		12		1.0
596		25		12	1.0
597			12	25	1.0
598		22	77		0.999999

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain