SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene5440

Length: 615 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene5440

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene23034	4/16
SustainPine v2.0	sp_v2.0_unigene24557	1/16
SustainPine v2.0	sp_v2.0_unigene78662	11/16

Source	Descriptions	Term	Type	e value	Identity
AutoFact	D-alanyl-D-alanine endopeptidase, putative n=1 Tax=Ricinus communis RepID=B9RIX2_RICCO	-	-	7.0e-07	44%
FL-Next	tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida).	-	-	0.0	59%
Blast2go	signal peptide peptidase-like protein	-	-	3.57402e-09	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	endosome	GO:0005768	Cellular Component	3.57402e-09	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase A22, presenilin signal peptide	IPR006639	-	0.0	-
Sma3	Peptidase A22B, signal peptide peptidase	IPR007369	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 29)

Position	A %	C %	G %	T %	Probability
56	33	33		33	0.997753
57		33	66		0.997452
59		33	66		1.0
64		33		66	0.997452
71	66			33	0.997452
72	66		33		0.997452
74	66	33			0.997452
118	66		11	22	0.999999
119	66	22		11	0.999999
120	22	77			0.999999
121	88		11		0.923564
122	88			11	0.923564
123			11	88	0.923564
124	11			88	0.923564
130			11	88	0.923564
134	88			11	0.923564
135		11	88		0.923564
136	11		88		0.923564
138		88		11	0.923564
140	10		90		0.90298
142		10		90	0.90298
143		90	10		0.90298
145	10			90	0.90298
148	90			10	0.90298
152	90			10	0.90298
154	10			90	0.90298
155		10		90	0.90298
157		10	90		0.90298
158	10	90			0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain